RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 RAB14P61106 215 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 OPCMLQ14982 345 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 SGCAQ16586 387 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 SCGB2B2Q4G0G5 96 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 ESCO2Q56NI9 601 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 C10orf128Q5T292 105 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 OR2W3Q7Z3T1 314 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 TRAPPC6BQ86SZ2 158 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 FJX1Q86VR8 437 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 ZNF101Q8IZC7 436 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 GJC3Q8NFK1 279 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 ELMOD3Q96FG2 381 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 SLX1AQ9BQ83 275 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 SH2D2AQ9NP31 389 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 MYOZ1Q9NP98 299 aaPredicted RBP9.79□□□□□ -0.84
CMSS1-208ENST00000496116 PLSCR2Q9NRY7 297 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 LINC00862A6NCI5 91 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 HMSDA8MTL9 139 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 H3BUI4 141 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 CHRM2P08172 466 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 ICAM2P13598 275 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 ABOP16442 354 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 KLK2P20151 261 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 RAC1P63000 192 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 QRFPP83859 136 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 ZXDAP98168 799 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 CDNFQ49AH0 187 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 RNASE10Q5GAN6 216 aaKnown RBP9.79□□□□□ -0.84
CMSS1-208ENST00000496116 CLVS2Q5SYC1 327 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 FAM57BQ71RH2 274 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 TMED4Q7Z7H5 227 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 DTWD2Q8NBA8 298 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 TMEM54Q969K7 222 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 TMEM41AQ96HV5 264 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 FAM71F1Q96KD3 344 aaPredicted RBP9.79□□□□□ -0.84
CMSS1-208ENST00000496116 SGCZQ96LD1 299 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 ZNF416Q9BWM5 594 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 CHST6Q9GZX3 395 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 PROK2Q9HC23 129 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 IFT46Q9NQC8 304 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 SLC2A8Q9NY64 477 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 PLEKHA6Q9Y2H5 1048 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 TMEM14DPA8MWL7 114 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 B4E171 279 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 ZIC3O60481 467 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 HCKP08631 526 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 ZNF735P0CB33 412 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 ZNF35P13682 527 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 CTSSP25774 331 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 TSPAN7P41732 249 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 H2BFSP57053 126 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 SEC61A1P61619 476 aaKnown RBP9.78□□□□□ -0.84
CMSS1-208ENST00000496116 HYAL4Q2M3T9 481 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 CLLU1Q5K131 121 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 GLIPR1L1Q6UWM5 242 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 MAML2Q8IZL2 1156 aaPredicted RBP9.78□□□□□ -0.84
CMSS1-208ENST00000496116 ARMC10Q8N2F6 343 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 C12orf45Q8N5I9 185 aaPredicted RBP9.78□□□□□ -0.84
CMSS1-208ENST00000496116 OR10R2Q8NGX6 335 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 KCNG3Q8TAE7 436 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 INTS12Q96CB8 462 aaKnown RBP9.78□□□□□ -0.84
CMSS1-208ENST00000496116 EDEM2Q9BV94 578 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 MRPS28Q9Y2Q9 187 aaKnown RBP9.78□□□□□ -0.84
CMSS1-208ENST00000496116 WDR87Q6ZQQ6 2873 aa9.78□□□□□ -0.84
CMSS1-208ENST00000496116 LEUTXA8MZ59 168 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 MCRIP1C9JLW8 97 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 SIX6O95475 246 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 WDPCPO95876 746 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 APOC1P02654 83 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 CXCL2P19875 107 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 MPZP25189 248 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 ZNF133P52736 654 aaPredicted RBP9.77□□□□□ -0.84
CMSS1-208ENST00000496116 UBE2MP61081 183 aaKnown RBP9.77□□□□□ -0.84
CMSS1-208ENST00000496116 GFOD2Q3B7J2 385 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 DCAF12Q5T6F0 453 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 PNLDC1Q8NA58 520 aaKnown RBP9.77□□□□□ -0.84
CMSS1-208ENST00000496116 OR4S1Q8NGB4 309 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 OR9K2Q8NGE7 335 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 NTNG2Q96CW9 530 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 PGAM5Q96HS1 289 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 GPER1Q99527 375 aa9.77□□□□□ -0.84
CMSS1-208ENST00000496116 IGHV3-15A0A0B4J1V0 119 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 TUBAL3A6NHL2 446 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 G3V3Y1 287 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 ARPC5O15511 151 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 DHHO43323 396 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 DNPH1O43598 174 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 P04436 131 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 CSN2P05814 226 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 UBBP0CG47 229 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 GNB3P16520 340 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 TBPP20226 339 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 ZNF84P51523 738 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 OC90Q02509 493 aaPredicted RBP9.77□□□□□ -0.85
CMSS1-208ENST00000496116 EIF3IQ13347 325 aaKnown RBP9.77□□□□□ -0.85
CMSS1-208ENST00000496116 ATPAF1Q5TC12 328 aaPredicted RBP9.77□□□□□ -0.85
CMSS1-208ENST00000496116 C3P1Q6ZMU1 363 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 FOXL2NBQ6ZUU3 175 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 CD163Q86VB7 1156 aa9.77□□□□□ -0.85
CMSS1-208ENST00000496116 ANGPTL6Q8NI99 470 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms