RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 PLEKHA8Q96JA3 519 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 KCNJ15Q99712 375 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 SLC6A7Q99884 636 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 COPS4Q9BT78 406 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 MRI1Q9BV20 369 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 NMNAT2Q9BZQ4 307 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 C1orf21Q9H246 121 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 CENPMQ9NSP4 180 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 DDX28Q9NUL7 540 aaKnown RBP10.69□□□□□ -0.7
PTPRF-214ENST00000496043 OR5V1Q9UGF6 321 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 WNK2Q9Y3S1 2297 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 RIIAD1A6NNX1 92 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 CD300LBA8K4G0 201 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 CST1P01037 141 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 GYPBP06028 91 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 SPARCP09486 303 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 RPS2P15880 293 aaKnown RBP10.68□□□□□ -0.7
PTPRF-214ENST00000496043 SPI1P17947 270 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 CA6P23280 308 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 OTX1P32242 354 aaPredicted RBP10.68□□□□□ -0.7
PTPRF-214ENST00000496043 CD200P41217 278 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 PRKXP51817 358 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 PRSS12P56730 875 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 GNB2P62879 340 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 ACTG1P63261 375 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 ZNF92Q03936 586 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 PAX8Q06710 450 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 PCK2Q16822 640 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 ARMCX4Q5H9R4 360 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 BTNL3Q6UXE8 466 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 LRRN1Q6UXK5 716 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 RBMS3Q6XE24 437 aaKnown RBP10.68□□□□□ -0.7
PTPRF-214ENST00000496043 KLBQ86Z14 1044 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 SPERTQ8NA61 448 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 OR10G2Q8NGC3 310 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 OR4Q3Q8NH05 313 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 Q8TCH9 128 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 GIPC3Q8TF64 312 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 C22orf15Q8WYQ4 148 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 DVL3Q92997 716 aaPredicted RBP10.68□□□□□ -0.7
PTPRF-214ENST00000496043 SLAMF6Q96DU3 332 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 ASB9Q96DX5 294 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 NEIL1Q96FI4 390 aaPredicted RBP10.68□□□□□ -0.7
PTPRF-214ENST00000496043 TMEM246Q9BRR3 403 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 CHID1Q9BWS9 393 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 SSBP3Q9BWW4 388 aaPredicted RBP10.68□□□□□ -0.7
PTPRF-214ENST00000496043 SP140LQ9H930 580 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 ARMC1Q9NVT9 282 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 VNN3Q9NY84 501 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 TAS2R1Q9NYW7 299 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 NUP50Q9UKX7 468 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 N6AMT1Q9Y5N5 214 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 COMMD3-BMI1R4GMX3 469 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 ARHGAP32A7KAX9 2087 aa10.68□□□□□ -0.7
PTPRF-214ENST00000496043 TMEM89A2RUT3 159 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 GNGT2O14610 69 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 SOX14O95416 240 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 CD80P33681 288 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 SLC15A1P46059 708 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 MZT1Q08AG7 82 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 SNAI3Q3KNW1 292 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 ZNF404Q494X3 552 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 FAM201AQ5SY85 155 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 LYPD4Q6UWN0 246 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 NLRC3Q7RTR2 1065 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 PLPP7Q8NBV4 271 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 OR8B3Q8NGG8 313 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 OR6K6Q8NGW6 343 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 TEX47Q8TBZ9 253 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 RAB40AQ8WXH6 277 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 OR8B2Q96RD0 313 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 FEVQ99581 238 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 THTPAQ9BU02 230 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 FN3KRPQ9HA64 309 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 CMC2Q9NRP2 79 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 UFSP2Q9NUQ7 469 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 RNF7Q9UBF6 113 aa10.67□□□□□ -0.7
PTPRF-214ENST00000496043 TANC2Q9HCD6 1990 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 AQP12BA6NM10 295 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 ZNF878C9JN71 531 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 H3BN98 237 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 ACOT8O14734 319 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 XRCC2O43543 280 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 FAM20BO75063 409 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 CLUP10909 449 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 ZNF3P17036 446 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 HOXB6P17509 224 aaKnown RBP10.66□□□□□ -0.7
PTPRF-214ENST00000496043 GRK5P34947 590 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 DDOSTP39656 456 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 COMPP49747 757 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-214ENST00000496043 GRB2P62993 217 aaKnown RBP10.66□□□□□ -0.7
PTPRF-214ENST00000496043 EIF2B1Q14232 305 aaKnown RBP10.66□□□□□ -0.7
PTPRF-214ENST00000496043 GLYATL3Q5SZD4 288 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 PRAMEF6Q5VXH4 476 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 SHFQ7M4L6 423 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 AQP12AQ8IXF9 295 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 ZDHHC22Q8N966 263 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 OR2AE1Q8NHA4 323 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 OTULINQ96BN8 352 aa10.66□□□□□ -0.7
PTPRF-214ENST00000496043 CLPTM1LQ96KA5 538 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms