RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ZIC4Q8N9L1 334 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 OR9K2Q8NGE7 335 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 AGR3Q8TD06 166 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 CCDC107Q8WV48 283 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 IFT81Q8WYA0 676 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 MUCL1Q96DR8 90 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 SLC35G5Q96KT7 338 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 SGK494Q96LW2 274 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 NSMCE2Q96MF7 247 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 ZNF385AQ96PM9 386 aaKnown RBP3.58□□□□□ -1.84
VPS52-222ENST00000495981 HOXD1Q9GZZ0 328 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 SLC38A1Q9H2H9 487 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 OR51I1Q9H343 314 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 NOX3Q9HBY0 568 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 GPN1Q9HCN4 374 aaPredicted RBP3.58□□□□□ -1.84
VPS52-222ENST00000495981 MYOZ1Q9NP98 299 aaPredicted RBP3.58□□□□□ -1.84
VPS52-222ENST00000495981 A4GALTQ9NPC4 353 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 ESM1Q9NQ30 184 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 CA10Q9NS85 328 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 DCDC2Q9UHG0 476 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 POU2F3Q9UKI9 436 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 FAF1Q9UNN5 650 aaPredicted RBP3.58□□□□□ -1.84
VPS52-222ENST00000495981 MOKQ9UQ07 419 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 SLC35A3Q9Y2D2 325 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 HDGFL3Q9Y3E1 203 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 FKBP7Q9Y680 259 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 KIAA1109Q2LD37 5005 aa3.58□□□□□ -1.84
VPS52-222ENST00000495981 CSMD3Q7Z407 3707 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 TMED7-TICAM2A0A0A6YYA0 188 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 LOC390937A0A1W2PQ73 354 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 CIB4A0PJX0 185 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 TMEM72A0PK05 275 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 SMIM23A6NLE4 172 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 CCT8L1PA6NM43 557 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 C15orf62A8K5M9 175 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 TMEM114B3SHH9 223 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 FTCDNL1E5RQL4 147 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 GPR171O14626 319 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 ZNF208O43345 1280 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 LANCL1O43813 399 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 SNX3O60493 162 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 NPIPB7O75200 414 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 STX11O75558 287 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 LYPLA1O75608 230 aaPredicted RBP3.57□□□□□ -1.84
VPS52-222ENST00000495981 TFAP2AP05549 437 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 FGF4P08620 206 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 PGCP20142 388 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 HNF1AP20823 631 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 PRPS1L1P21108 318 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 NUP214P35658 2090 aaPredicted RBP3.57□□□□□ -1.84
VPS52-222ENST00000495981 MNDAP41218 407 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 PDLIM4P50479 330 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 SNRPD2P62316 118 aaKnown RBP3.57□□□□□ -1.84
VPS52-222ENST00000495981 TUBA1BP68363 451 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 ROR2Q01974 943 aaKnown RBP3.57□□□□□ -1.84
VPS52-222ENST00000495981 NAAAQ02083 359 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 TMED1Q13445 227 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 RAB35Q15286 201 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 MRPL2Q5T653 305 aaKnown RBP3.57□□□□□ -1.84
VPS52-222ENST00000495981 OR4F3Q6IEY1 312 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 OR7E24Q6IFN5 339 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 C11orf87Q6NUJ2 197 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 TUBA1AQ71U36 451 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 EIF3MQ7L2H7 374 aaKnown RBP3.57□□□□□ -1.84
VPS52-222ENST00000495981 C16orf62Q7Z3J2 963 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 WDFY1Q8IWB7 410 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 STHQ8IWL8 128 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 IQCF2Q8IXL9 164 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 CDK20Q8IZL9 346 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 UBE2J2Q8N2K1 259 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 ANKFN1Q8N957 763 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 FNDC5Q8NAU1 212 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 NUP37Q8NFH4 326 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 OR8J2Q8NGG1 315 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 OR1K1Q8NGR3 316 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 PRSS3P2Q8NHM4 247 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 FAM216AQ8WUB2 273 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 TMEM234Q8WY98 164 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 RAB8BQ92930 207 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 TESCQ96BS2 214 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 ROPN1LQ96C74 230 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 NEURL3Q96EH8 262 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 CHMP6Q96FZ7 201 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 PPP3R2Q96LZ3 170 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 FOXN4Q96NZ1 517 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 TSSK2Q96PF2 358 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 SLC38A2Q96QD8 506 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 C1QTNF6Q9BXI9 259 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 IQCGQ9H095 443 aaKnown RBP3.57□□□□□ -1.84
VPS52-222ENST00000495981 RACGAP1Q9H0H5 632 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 C5orf66Q9H5L9 145 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 ZNF442Q9H7R0 627 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 FKRPQ9H9S5 495 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 ATAD3AQ9NVI7 634 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 DCAF16Q9NXF7 216 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 ZNF224Q9NZL3 707 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 TMEM181Q9P2C4 612 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 SLC17A7Q9P2U7 560 aa3.57□□□□□ -1.84
VPS52-222ENST00000495981 SEC14L4Q9UDX3 406 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms