RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SLC27A4Q6P1M0 643 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 C16orf89Q6UX73 402 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 ZNF841Q6ZN19 808 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 PARP8Q8N3A8 854 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 FITM2Q8N6M3 262 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 ZNF511Q8NB15 262 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 AQP11Q8NBQ7 271 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 OR2AJ1Q8NGZ0 328 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 JMJD8Q96S16 334 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 ADAT1Q9BUB4 502 aaKnown RBP9.71□□□□□ -0.86
VTI1A-208ENST00000494728 HCAR1Q9BXC0 346 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 NMNAT2Q9BZQ4 307 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 TMEM100Q9NV29 134 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 ARMC1Q9NVT9 282 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 ACTR3BQ9P1U1 418 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 OR5V1Q9UGF6 321 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 U3KQV3 271 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 CD300LBA8K4G0 201 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 PTBP3O95758 552 aaKnown RBP9.7□□□□□ -0.86
VTI1A-208ENST00000494728 PLATP00750 562 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 IFNGR2P38484 337 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 PITPNBP48739 271 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 PRKXP51817 358 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 GNB2P62879 340 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 ECH1Q13011 328 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 PCK2Q16822 640 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 SLC36A3Q495N2 470 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 LINC01590Q5TEZ4 76 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 LCN8Q6JVE9 175 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 RASSF6Q6ZTQ3 369 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 PGAP1Q75T13 922 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 SPATC1Q76KD6 591 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 MRPL21Q7Z2W9 205 aaKnown RBP9.7□□□□□ -0.86
VTI1A-208ENST00000494728 DCXRQ7Z4W1 244 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 WDR86Q86TI4 376 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 LNX2Q8N448 690 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 IQCF1Q8N6M8 205 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 C3orf56Q8N813 242 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 OR52L1Q8NGH7 329 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 Q8TCH9 128 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 UPRTQ96BW1 309 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 NEIL1Q96FI4 390 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-208ENST00000494728 AMELYQ99218 206 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 MRI1Q9BV20 369 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 TSSK6Q9BXA6 273 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 TRIM15Q9C019 465 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 PPP1R3EQ9H7J1 279 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 MED20Q9H944 212 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 SMURF1Q9HCE7 757 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 TBC1D23Q9NUY8 699 aa9.7□□□□□ -0.86
VTI1A-208ENST00000494728 C3orf80F5H4A9 247 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 IFNL4K9M1U5 179 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 DCTN3O75935 186 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 CCNB2O95067 398 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 SPARCP09486 303 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 HKR1P10072 659 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 ZNF823P16415 610 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 SPI1P17947 270 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 PRTN3P24158 256 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 FPR2P25090 351 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 PSMB10P40306 273 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 TPTEP56180 551 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 ELF3P78545 371 aaPredicted RBP9.69□□□□□ -0.86
VTI1A-208ENST00000494728 MXRA7P84157 204 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 WDR25Q64LD2 544 aaPredicted RBP9.69□□□□□ -0.86
VTI1A-208ENST00000494728 SFRP4Q6FHJ7 346 aaPredicted RBP9.69□□□□□ -0.86
VTI1A-208ENST00000494728 BRD3OSQ6XYD6 125 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 DCDC5Q6ZRR9 648 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 ZNF826PQ6ZT77 177 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 FGFRL1Q8N441 504 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 CELF2-AS1Q8N7Q2 184 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 OR56B2PQ8NGI1 322 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 OR2T4Q8NH00 348 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 SPRYD4Q8WW59 207 aaPredicted RBP9.69□□□□□ -0.86
VTI1A-208ENST00000494728 RAB40AQ8WXH6 277 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 SLAMF6Q96DU3 332 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 CLPTM1LQ96KA5 538 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 NIPSNAP1Q9BPW8 284 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 MIOXQ9UGB7 285 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 KCNG2Q9UJ96 466 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 PCDHGB1Q9Y5G3 927 aa9.69□□□□□ -0.86
VTI1A-208ENST00000494728 A0A1B0GW55 424 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 DHRS12A0PJE2 317 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 FAM183AA6NL82 134 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 LRRC30A6NM36 301 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 KRT36O76013 467 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 FSTL3O95633 263 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 SFTPBP07988 381 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 DUX4L2P0CJ85 424 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 DUX4L3P0CJ86 424 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 DUX4L4P0CJ87 422 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 DUX4L5P0CJ88 424 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 DUX4L6P0CJ89 424 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 DUX4L7P0CJ90 424 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 T-ENOLP0DO92 83 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 ENTPD1P49961 510 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 FGF12P61328 243 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 MALLQ13021 153 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 BAMBIQ13145 260 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 SLC9A3R2Q15599 337 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms