RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 PAK1IP1Q9NWT1 392 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-223ENST00000494123 ERVK-18Q9QC07 812 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 CLEC2DQ9UHP7 191 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 EDARQ9UNE0 448 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 LAMP3Q9UQV4 416 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 ERGIC3Q9Y282 383 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 HTR1AP08908 422 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 ZNF250P15622 560 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 MPV17P39210 176 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 GBX2P52951 348 aaPredicted RBP12.5□□□□□ -0.41
BRCA1-223ENST00000494123 SNRPD2P62316 118 aaKnown RBP12.5□□□□□ -0.41
BRCA1-223ENST00000494123 MRPL28Q13084 256 aaKnown RBP12.5□□□□□ -0.41
BRCA1-223ENST00000494123 GK2Q14410 553 aaPredicted RBP12.5□□□□□ -0.41
BRCA1-223ENST00000494123 HLXQ14774 488 aaPredicted RBP12.5□□□□□ -0.41
BRCA1-223ENST00000494123 MSMPQ1L6U9 139 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 OR2G6Q5TZ20 316 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 MBNL2Q5VZF2 373 aaKnown RBP12.5□□□□□ -0.41
BRCA1-223ENST00000494123 PGAP1Q75T13 922 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 COMMD2Q86X83 199 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 OR8B12Q8NGG6 310 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 SPRYD4Q8WW59 207 aaPredicted RBP12.5□□□□□ -0.41
BRCA1-223ENST00000494123 SGCDQ92629 289 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 RORBQ92753 470 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 CMBLQ96DG6 245 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 PELI1Q96FA3 418 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 REEP6Q96HR9 211 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 CCL19Q99731 98 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 YTHDF1Q9BYJ9 559 aaKnown RBP12.5□□□□□ -0.41
BRCA1-223ENST00000494123 OPA3Q9H6K4 179 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 CBLN4Q9NTU7 201 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 NUFIP1Q9UHK0 495 aaKnown RBP12.5□□□□□ -0.41
BRCA1-223ENST00000494123 OR52A1Q9UKL2 312 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 LRCH1Q9Y2L9 728 aa12.5□□□□□ -0.41
BRCA1-223ENST00000494123 C5orf63A6NC05 138 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 TIMM8AO60220 97 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-223ENST00000494123 SRSF10O75494 262 aaKnown RBP12.49□□□□□ -0.41
BRCA1-223ENST00000494123 CLPTM1O96005 669 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 PNPP00491 289 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 SOD3P08294 240 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 DANCRP0C864 163 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 BMP4P12644 408 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 RAC2P15153 192 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 ANOS1P23352 680 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 CFL1P23528 166 aaKnown RBP12.49□□□□□ -0.41
BRCA1-223ENST00000494123 GABARAPL2P60520 117 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 EFNB3Q15768 340 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 MOGQ16653 247 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 FBXW12Q6X9E4 464 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 LRP11Q86VZ4 500 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 OR52N1Q8NH53 320 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 HAVCR2Q8TDQ0 301 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 NRGNQ92686 78 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 MND1Q9BWT6 205 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 CDCA4Q9BXL8 241 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 RGCCQ9H4X1 137 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 GPR160Q9UJ42 338 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 ABCA12Q86UK0 2595 aa12.49□□□□□ -0.41
BRCA1-223ENST00000494123 IGLV3-9A0A075B6K5 115 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 TMEM129A0AVI4 362 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 GGT3PA6NGU5 568 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 SELEP16581 610 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 EVX1P49640 407 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 ZNF92Q03936 586 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 PSG7Q13046 419 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 NKPD1Q17RQ9 610 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 PAMR1Q6UXH9 720 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 PRSS48Q7RTY5 328 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 DTX2Q86UW9 622 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 CATSPERDQ86XM0 798 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 GATAD2BQ8WXI9 593 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 SGK3Q96BR1 496 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 HAVCR1Q96D42 359 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 TRAF4Q9BUZ4 470 aaPredicted RBP12.48□□□□□ -0.41
BRCA1-223ENST00000494123 LIME1Q9H400 295 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 DYNLRB1Q9NP97 96 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 G6PC2Q9NQR9 355 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 TAAR3PQ9P1P4 343 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 ZNF319Q9P2F9 582 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 ZNF391Q9UJN7 358 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 ASH1LQ9NR48 2969 aaKnown RBP12.48□□□□□ -0.41
BRCA1-223ENST00000494123 DSCAMO60469 2012 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 LRBAP50851 2863 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 A0A0U1RQV5 110 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 PLSCR5A0PG75 271 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 IGHV3-13P01766 116 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 MT-ND2P03891 347 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 RAF1P04049 648 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 WNT4P56705 351 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 PRSS12P56730 875 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 ODF4Q2M2E3 257 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 ALKBH6Q3KRA9 238 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 RNLSQ5VYX0 342 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 OR2T2Q6IF00 324 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 KLBQ86Z14 1044 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 ELMOD2Q8IZ81 293 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 OR2G2Q8NGZ5 317 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 PPP1R14AQ96A00 147 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 LURAP1Q96LR2 239 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 TRIM36Q9NQ86 728 aa12.48□□□□□ -0.41
BRCA1-223ENST00000494123 BABAM2Q9NXR7 383 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms