RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PTDSS2Q9BVG9 487 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 ADAM19Q9H013 955 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 KCNE3Q9Y6H6 103 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 DHHO43323 396 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 CDK5Q00535 292 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 TESK1Q15569 626 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 FAM219BQ5XKK7 198 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 OR8G2PQ6IF36 304 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 HIST2H3AQ71DI3 136 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 OR2AK2Q8NG84 335 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 UFSP2Q9NUQ7 469 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 SLCO1C1Q9NYB5 712 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 RNF150Q9ULK6 438 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 ANKUB1A6NFN9 424 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 FGF9P31371 208 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-207ENST00000494090 SLC25A35Q3KQZ1 300 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 CMTM3Q96MX0 182 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 ARRDC1-AS1Q9H2J1 176 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 GNB4Q9HAV0 340 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 LGALS8O00214 317 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 SPNP16150 400 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 MAGEB1P43366 347 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 REEP6Q96HR9 211 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 MEIKINA0A087WXM9 373 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 GALR2O43603 387 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-207ENST00000494090 RPS27P42677 84 aaKnown RBP17.31■□□□□ 0.36
COL27A1-207ENST00000494090 WFDC8Q8IUA0 241 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 SPACA9Q96E40 222 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-207ENST00000494090 B9D1Q9UPM9 204 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 FLVCR1Q9Y5Y0 555 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 AGFG1P52594 562 aaKnown RBP17.31■□□□□ 0.36
COL27A1-207ENST00000494090 DSCR4P56555 118 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-207ENST00000494090 ADGRG3Q86Y34 549 aa17.31■□□□□ 0.36
COL27A1-207ENST00000494090 M0R1B8 84 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 XRCC3O43542 346 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 CT45A10P0DMU9 189 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 MGST1P10620 155 aaKnown RBP17.3■□□□□ 0.36
COL27A1-207ENST00000494090 UBE2G1P62253 170 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 SFT2D1Q8WV19 159 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 EDARADDQ8WWZ3 215 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 CIB3Q96Q77 187 aaPredicted RBP17.3■□□□□ 0.36
COL27A1-207ENST00000494090 TUBAL3A6NHL2 446 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 TERTO14746 1132 aaKnown RBP17.3■□□□□ 0.36
COL27A1-207ENST00000494090 ADRB1P08588 477 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 GFERP55789 205 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 RPL11P62913 178 aaKnown RBP17.3■□□□□ 0.36
COL27A1-207ENST00000494090 FXNQ16595 210 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 OR4Q3Q8NH05 313 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 PATZ1Q9HBE1 687 aaKnown RBP17.3■□□□□ 0.36
COL27A1-207ENST00000494090 MED29Q9NX70 200 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 NXPH3O95157 252 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 EXOSC2Q13868 293 aaKnown RBP17.3■□□□□ 0.36
COL27A1-207ENST00000494090 ZNF680Q8NEM1 530 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 WDR34Q96EX3 536 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 RPA2P15927 270 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 GALP22466 123 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 TMPRSS11FQ6ZWK6 438 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 GLCCI1Q86VQ1 547 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 MFSD4AQ8N468 514 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 MAFAQ8NHW3 353 aaPredicted RBP17.3■□□□□ 0.36
COL27A1-207ENST00000494090 NUDCD2Q8WVJ2 157 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 CYSLTR2Q9NS75 346 aa17.3■□□□□ 0.36
COL27A1-207ENST00000494090 TMEM265A0A087WTH1 108 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 SCGB1D1O95968 90 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 DCTDP32321 178 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 CDH26Q8IXH8 852 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 NUP205Q92621 2012 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 A0A087WUJ7 227 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 BHLHE40O14503 412 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 H2AFB1P0C5Y9 115 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 OR13C7P0DN81 318 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 DEFA6Q01524 100 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 DHODHQ02127 395 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 TOMM34Q15785 309 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-207ENST00000494090 FAM185AQ8N0U4 392 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 ELFN2Q5R3F8 820 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 DOK1Q99704 481 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 C1QTNF6Q9BXI9 259 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 UBE2MP61081 183 aaKnown RBP17.29■□□□□ 0.36
COL27A1-207ENST00000494090 SNRPNP63162 240 aaKnown RBP17.29■□□□□ 0.36
COL27A1-207ENST00000494090 ERHP84090 104 aaKnown RBP17.29■□□□□ 0.36
COL27A1-207ENST00000494090 FLI1Q01543 452 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-207ENST00000494090 LYG2Q86SG7 212 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 BAGE3Q86Y29 109 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 BAGE2Q86Y30 109 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 FGF14Q92915 247 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 FAM117AQ9C073 453 aa17.29■□□□□ 0.36
COL27A1-207ENST00000494090 SIRPB1O00241 398 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 AKR7A2O43488 359 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 TGM1P22735 817 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 ADIRFQ15847 76 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 DERL3Q96Q80 235 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 PAPPAQ13219 1627 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 TRAV17A0A0B4J275 112 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 TRGV8A0A0C4DH27 118 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 HRH1P35367 487 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 HMGA2P52926 109 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 MYBPHQ13203 477 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 SMIM21Q3B7S5 101 aa17.28■□□□□ 0.36
COL27A1-207ENST00000494090 WDFY2Q96P53 400 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms