RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 RAB40ALP0C0E4 278 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 LINC00614P0C842 121 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 PRKAR1AP10644 381 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 CD1BP29016 333 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 PTGFRP43088 359 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 CAMLGP49069 296 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 BLVRAP53004 296 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 TMEM33P57088 247 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 STXBP1P61764 594 aaKnown RBP2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 NUTF2P61970 127 aaKnown RBP2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 DLK1P80370 383 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 ACY1Q03154 408 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 SREBF2Q12772 1141 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 STX4Q12846 297 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 SGCAQ16586 387 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 HIST3H3Q16695 136 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 TCTN1Q2MV58 587 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 LINC00303Q3SY05 128 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 SGO1Q5FBB7 561 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 FRG2Q64ET8 278 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 DLK2Q6UY11 383 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 CFAP77Q6ZQR2 320 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR2W3Q7Z3T1 314 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZBTB8OSQ8IWT0 167 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 PRSS35Q8N3Z0 413 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR2AK2Q8NG84 335 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR51G2Q8NGK0 314 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF519Q8TB69 540 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 RAB40AQ8WXH6 277 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 FGF13Q92913 245 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 MOAP1Q96BY2 351 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF524Q96C55 264 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 PELI1Q96FA3 418 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 FRG2BQ96QU4 278 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR52E6Q96RD3 313 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC17A9Q9BYT1 436 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 CTDSP1Q9GZU7 261 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 NT5MQ9NPB1 228 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZFP57Q9NU63 452 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 CLEC4EQ9ULY5 219 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 ERVK-19Q9WJR5 959 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 LAMA3Q16787 3333 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 RELNP78509 3460 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 A0A0B4J2E0 115 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 A0A1B0GX12 115 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 FABP12A6NFH5 140 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 LINC01546A6NGU7 62 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZFP92A6NM28 416 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 IFITM5A6NNB3 132 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 C17orf100A8MU93 164 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 RHODO00212 210 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC33A1O00400 549 aaPredicted RBP2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 SDC3O75056 442 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 CDRT1O95170 752 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 JCHAINP01591 159 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 KLK3P07288 261 aaPredicted RBP2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 AKR1A1P14550 325 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 TSPAN8P19075 237 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 PSMB1P20618 241 aaKnown RBP2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 EDN2P20800 178 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 SOAT1P35610 550 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 SNCAP37840 140 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 CDX1P47902 265 aaPredicted RBP2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 NPY4RP50391 375 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 CAPZA1P52907 286 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 CDH12P55289 794 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 FOXL2P58012 376 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR10A3P58181 314 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 TAS2R43P59537 309 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 TAS2R50P59544 299 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 IL5RAQ01344 420 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF763Q0D2J5 394 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF141Q15928 474 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 VWC2Q2TAL6 325 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 C9orf50Q5SZB4 431 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 AADACL3Q5VUY0 350 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 C22orf42Q6IC83 251 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 MED27Q6P2C8 311 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 CORO6Q6QEF8 472 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 PRSS57Q6UWY2 283 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 TOMM20LQ6UXN7 152 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 TMPPEQ6ZT21 453 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 PID1Q7Z2X4 250 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF547Q8IVP9 402 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 DND1Q8IYX4 353 aaKnown RBP2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 MUC20Q8N307 709 aaPredicted RBP2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 KDM8Q8N371 416 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 ATPAF2Q8N5M1 289 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 AQP11Q8NBQ7 271 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC37A3Q8NCC5 494 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 NPEPL1Q8NDH3 523 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 BEST4Q8NFU0 473 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR2M7Q8NG81 312 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR13C2Q8NGS9 318 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 DUSP19Q8WTR2 217 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 SORCS1Q8WY21 1168 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 THRSPQ92748 146 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 RNFT2Q96EX2 444 aa2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 NARS2Q96I59 477 aaKnown RBP2.2□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF385AQ96PM9 386 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms