RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SLC16A13Q7RTY0 426 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 SZRD1Q7Z422 152 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 REC114Q7Z4M0 266 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-234ENST00000493923 TPRA1Q86W33 373 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 CIARTQ8N365 385 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-234ENST00000493923 LINC00471Q8N535 108 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 MEIOBQ8N635 442 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 BPIFCQ8NFQ6 507 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 OR10K1Q8NGX5 313 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 THAP6Q8TBB0 222 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 GNPDA2Q8TDQ7 276 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 C15orf40Q8WUR7 153 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 PCNPQ8WW12 178 aaKnown RBP7.22□□□□□ -1.25
HDAC6-234ENST00000493923 GEMIN6Q8WXD5 167 aaKnown RBP7.22□□□□□ -1.25
HDAC6-234ENST00000493923 CDS1Q92903 461 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 PPCDCQ96CD2 204 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 ZNF764Q96H86 408 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-234ENST00000493923 DDOQ99489 341 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 TSSK6Q9BXA6 273 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 TBL1XR1Q9BZK7 514 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 IKZF5Q9H5V7 419 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 CHMP1AQ9HD42 196 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-234ENST00000493923 NANSQ9NR45 359 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 SMCO4Q9NRQ5 59 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 MED17Q9NVC6 651 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 GFOD1Q9NXC2 390 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 RASL12Q9NYN1 266 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 G3V3Q6 166 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 EIF1AYO14602 144 aaKnown RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 TNFSF11O14788 317 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 SCAMP2O15127 329 aaKnown RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 C6orf47O95873 294 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 HMGN2P05204 90 aaKnown RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 IFI6P09912 130 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 GKN3PP0CG01 181 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 OSMP13725 252 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 NID1P14543 1247 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 TBXA2RP21731 343 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 EDNRAP25101 427 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 GPX4P36969 197 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 CDKN2CP42773 168 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 EIF1AXP47813 144 aaKnown RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 RBP2P50120 134 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 MECP2P51608 486 aaKnown RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 HCCSP53701 268 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 PSMA6P60900 246 aaKnown RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 RPS26P62854 115 aaKnown RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 KCNJ10P78508 379 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 ZNF117Q03924 483 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 RAB40BQ12829 278 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 LASP1Q14847 261 aaKnown RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 ZNHIT3Q15649 155 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 HMGN3Q15651 99 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 EXOC3L2Q2M3D2 409 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 PLPPR5Q32ZL2 321 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 CBLN3Q6UW01 205 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 ALKAL2Q6UX46 152 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 GTPBP8Q8N3Z3 284 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 POMGNT2Q8NAT1 580 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 C11orf65Q8NCR3 313 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 OR5J2Q8NH18 312 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 OR10D3Q8NH80 312 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 OR5AK3PQ8NH89 298 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 ROBO4Q8WZ75 1007 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 OSTF1Q92882 214 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 PIK3IP1Q96FE7 263 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 HS6ST2Q96MM7 605 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 MS4A4EQ96PG1 132 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 C2orf88Q9BSF0 95 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 SRXN1Q9BYN0 137 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 EGLN1Q9GZT9 426 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 ARL6Q9H0F7 186 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 C20orf85Q9H1P6 137 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 UNKLQ9H9P5 680 aaKnown RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 DUSP22Q9NRW4 184 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 C19orf12Q9NSK7 152 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 ACSS1Q9NUB1 689 aaPredicted RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 GPATCH2Q9NW75 528 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 KCNE5Q9UJ90 142 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 MRTO4Q9UKD2 239 aaKnown RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 SF3B6Q9Y3B4 125 aaKnown RBP7.21□□□□□ -1.26
HDAC6-234ENST00000493923 ATRQ13535 2644 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 DSPPQ9NZW4 1301 aa7.21□□□□□ -1.26
HDAC6-234ENST00000493923 C9orf170A2RU37 121 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 NPIPB9F8W1W9 429 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 BLOC1S5-TXNDC5H3BN57 136 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 GTPBP1O00178 669 aaKnown RBP7.2□□□□□ -1.26
HDAC6-234ENST00000493923 CLIC1O00299 241 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 KLF4O43474 513 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 FZD7O75084 574 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 KHDRBS3O75525 346 aaKnown RBP7.2□□□□□ -1.26
HDAC6-234ENST00000493923 CRYBA1P05813 215 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 CRHP06850 196 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 NGFRP08138 427 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 PRPS1L1P21108 318 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 CRYGSP22914 178 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 FPR3P25089 353 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 GIFP27352 417 aa7.2□□□□□ -1.26
HDAC6-234ENST00000493923 KCNJ3P48549 501 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms