RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 FBXO32Q969P5 355 aa3.63□□□□□ -1.83
SMG7-208ENST00000493609 LRRC39Q96DD0 335 aa3.63□□□□□ -1.83
SMG7-208ENST00000493609 SNF8Q96H20 258 aa3.63□□□□□ -1.83
SMG7-208ENST00000493609 PLEKHA8Q96JA3 519 aa3.63□□□□□ -1.83
SMG7-208ENST00000493609 OR8B4Q96RC9 309 aa3.63□□□□□ -1.83
SMG7-208ENST00000493609 SORT1Q99523 831 aa3.63□□□□□ -1.83
SMG7-208ENST00000493609 SLCO1B3Q9NPD5 702 aa3.63□□□□□ -1.83
SMG7-208ENST00000493609 RAB26Q9ULW5 256 aa3.63□□□□□ -1.83
SMG7-208ENST00000493609 PACSIN2Q9UNF0 486 aaPredicted RBP3.63□□□□□ -1.83
SMG7-208ENST00000493609 UTP11Q9Y3A2 253 aaKnown RBP3.63□□□□□ -1.83
SMG7-208ENST00000493609 NPTNQ9Y639 398 aa3.63□□□□□ -1.83
SMG7-208ENST00000493609 SCN8AQ9UQD0 1980 aa3.63□□□□□ -1.83
SMG7-208ENST00000493609 MIA3Q5JRA6 1907 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.62□□□□□ -1.83
SMG7-208ENST00000493609 A0A096LNJ9 63 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 OR52A4PA6NMU1 304 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 DNALI1O14645 258 aaPredicted RBP3.62□□□□□ -1.83
SMG7-208ENST00000493609 MFSD11O43934 449 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 CST8O60676 142 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 ICOSLGO75144 302 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 SS18L1O75177 396 aaPredicted RBP3.62□□□□□ -1.83
SMG7-208ENST00000493609 CLDN11O75508 207 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 C1orf105O95561 183 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 IGKV3-11P04433 115 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 CSF3P09919 207 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 TCN1P20061 433 aaPredicted RBP3.62□□□□□ -1.83
SMG7-208ENST00000493609 HSPA9P38646 679 aaKnown RBP3.62□□□□□ -1.83
SMG7-208ENST00000493609 SSR1P43307 286 aaKnown RBP3.62□□□□□ -1.83
SMG7-208ENST00000493609 SUCLG1P53597 346 aaKnown RBP3.62□□□□□ -1.83
SMG7-208ENST00000493609 CDH4P55283 916 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 TPI1P60174 286 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 DR1Q01658 176 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 C2orf54Q08AI8 447 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 TWF1Q12792 350 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 GGTLC2Q14390 218 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 SHHQ15465 462 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 ZNF77Q15935 545 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 TMEM183BQ1AE95 376 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 TSPO2Q5TGU0 170 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 SETD3Q86TU7 594 aaPredicted RBP3.62□□□□□ -1.83
SMG7-208ENST00000493609 TMEM183AQ8IXX5 376 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 RIBC1Q8N443 379 aaPredicted RBP3.62□□□□□ -1.83
SMG7-208ENST00000493609 ACTL9Q8TC94 416 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 ZNF707Q96C28 371 aaPredicted RBP3.62□□□□□ -1.83
SMG7-208ENST00000493609 LRRC45Q96CN5 670 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 LRRC58Q96CX6 371 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 MED8Q96G25 268 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 CAPZA3Q96KX2 299 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 TMEM109Q9BVC6 243 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 ZYG11BQ9C0D3 744 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 ZNF226Q9NYT6 803 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 EXTL2Q9UBQ6 330 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 OR12D3Q9UGF7 316 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 SLC7A8Q9UHI5 535 aa3.62□□□□□ -1.83
SMG7-208ENST00000493609 LSM7Q9UK45 103 aaKnown RBP3.62□□□□□ -1.83
SMG7-208ENST00000493609 TRAV19A0A0A6YYK7 116 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 IGKV1D-13A0A0B4J2D9 117 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 A0A1W2PPV9 198 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 HIDE1A8MVS5 230 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 F5H5T6 163 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 PEX7O00628 323 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 SLC9A3R1O14745 358 aaPredicted RBP3.61□□□□□ -1.83
SMG7-208ENST00000493609 COCHO43405 550 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 SNAI2O43623 268 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 IGLV2-23P01705 113 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 IGHV2-5P01817 119 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 FGF1P05230 155 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 IGKV1-13P0DP09 117 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 ADRB3P13945 408 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 TAGLN2P37802 199 aaKnown RBP3.61□□□□□ -1.83
SMG7-208ENST00000493609 CXCL5P42830 114 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 GPR6P46095 362 aaPredicted RBP3.61□□□□□ -1.83
SMG7-208ENST00000493609 EIF3EP60228 445 aaKnown RBP3.61□□□□□ -1.83
SMG7-208ENST00000493609 VSNL1P62760 191 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 PAX5Q02548 391 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 DMC1Q14565 340 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 C6orf226Q5I0X4 101 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 PPM1LQ5SGD2 360 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 PHYHD1Q5SRE7 291 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 KDELC1Q6UW63 502 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 KDM7AQ6ZMT4 941 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 TRMT10CQ7L0Y3 403 aaKnown RBP3.61□□□□□ -1.83
SMG7-208ENST00000493609 PUSL1Q8N0Z8 303 aaKnown RBP3.61□□□□□ -1.83
SMG7-208ENST00000493609 MAGOHBQ96A72 148 aaKnown RBP3.61□□□□□ -1.83
SMG7-208ENST00000493609 SGK3Q96BR1 496 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 ASB9Q96DX5 294 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 MSANTD3Q96H12 275 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 CALN1Q9BXU9 219 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 DHX35Q9H5Z1 703 aaKnown RBP3.61□□□□□ -1.83
SMG7-208ENST00000493609 UGT1A7Q9HAW7 530 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 UGT1A10Q9HAW8 530 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 UGT1A8Q9HAW9 530 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 MRM3Q9HC36 420 aaKnown RBP3.61□□□□□ -1.83
SMG7-208ENST00000493609 EXD2Q9NVH0 621 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 F11RQ9Y624 299 aaKnown RBP3.61□□□□□ -1.83
SMG7-208ENST00000493609 ARID1AO14497 2285 aa3.61□□□□□ -1.83
SMG7-208ENST00000493609 SPTBN5Q9NRC6 3674 aaKnown RBP3.61□□□□□ -1.83
SMG7-208ENST00000493609 SZT2Q5T011 3432 aa3.6□□□□□ -1.83
SMG7-208ENST00000493609 ANKRD36A6QL64 1941 aa3.6□□□□□ -1.83
SMG7-208ENST00000493609 MYLKQ15746 1914 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms