RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 GPR37O15354 613 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 MLNRO43193 412 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 APOC1P02654 83 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 ACSM4P0C7M7 580 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 H2AFXP16104 143 aaPredicted RBP9.66□□□□□ -0.86
COL6A3-213ENST00000493475 CDKN2AP42771 156 aaKnown RBP9.66□□□□□ -0.86
COL6A3-213ENST00000493475 SLC15A1P46059 708 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 ERFP50548 548 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 RAG2P55895 527 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 MEP1BQ16820 701 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 SLC18B1Q6NT16 456 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 CORO6Q6QEF8 472 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 DRAM2Q6UX65 266 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 PTCHD4Q6ZW05 846 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 TSEN54Q7Z6J9 526 aaKnown RBP9.66□□□□□ -0.86
COL6A3-213ENST00000493475 FTMTQ8N4E7 242 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 LINC00471Q8N535 108 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 FITM2Q8N6M3 262 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 SCCPDHQ8NBX0 429 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 PROKR2Q8NFJ6 384 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 SLC26A10Q8NG04 563 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 OR2T4Q8NH00 348 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 OR4K13Q8NH42 304 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 LRTOMTQ8WZ04 291 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 ZNF799Q96GE5 643 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 CCT8L2Q96SF2 557 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 NMNAT3Q96T66 252 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 OR52D1Q9H346 318 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 CCDC134Q9H6E4 229 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 UFSP2Q9NUQ7 469 aa9.66□□□□□ -0.86
COL6A3-213ENST00000493475 DCAF13Q9NV06 445 aaKnown RBP9.66□□□□□ -0.86
COL6A3-213ENST00000493475 MRPL15Q9P015 296 aaKnown RBP9.66□□□□□ -0.86
COL6A3-213ENST00000493475 IGLV1-36A0A0B4J1U3 117 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 TRBV4-1A0A0J9YWV2 114 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 IGHV3-64DA0A0J9YX35 117 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 A0A1B0GWJ7 208 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 hCG_1807616A0A1W2PRN6 198 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 A6NLC8 198 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 ANKRD30BLA7E2S9 258 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 H0YL77 283 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 LGALS8O00214 317 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 ADAM20O43506 726 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 FAM20BO75063 409 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 HLA-DPB1P04440 258 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 FABP3P05413 133 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 NCK1P16333 377 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 ZNF26P17031 533 aaPredicted RBP9.65□□□□□ -0.86
COL6A3-213ENST00000493475 CA6P23280 308 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 CFL1P23528 166 aaKnown RBP9.65□□□□□ -0.86
COL6A3-213ENST00000493475 RRM2P31350 389 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 DDOSTP39656 456 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 BLVRAP53004 296 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 PSME3P61289 254 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 PAX2Q02962 417 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 DEFB112Q30KQ8 113 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 FIP1L1Q6UN15 594 aaKnown RBP9.65□□□□□ -0.86
COL6A3-213ENST00000493475 BRD3OSQ6XYD6 125 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 ZNF620Q6ZNG0 422 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 ZBTB46Q86UZ6 589 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 LINC00346Q8IVM7 164 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 CMTM4Q8IZR5 234 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 OR6V1Q8N148 313 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 FAM86B1Q8N7N1 296 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 BOLLQ8N9W6 283 aaKnown RBP9.65□□□□□ -0.86
COL6A3-213ENST00000493475 OR8S1Q8NH09 359 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 GNPDA2Q8TDQ7 276 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 UBE2FQ969M7 185 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 PYURFQ96I23 114 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 C1orf147Q96MC9 270 aaPredicted RBP9.65□□□□□ -0.86
COL6A3-213ENST00000493475 TSSK2Q96PF2 358 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 COPS4Q9BT78 406 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 DPAGT1Q9H3H5 408 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 PRDM13Q9H4Q3 707 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 ACOXLQ9NUZ1 547 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 NDE1Q9NXR1 346 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 ABCD2Q9UBJ2 740 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 CYB5R1Q9UHQ9 305 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 FAM96BQ9Y3D0 163 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 PKD1L1Q8TDX9 2849 aa9.65□□□□□ -0.86
COL6A3-213ENST00000493475 OOEPA6NGQ2 149 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 CD300LBA8K4G0 201 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 BHLHE40O14503 412 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 XRCC2O43543 280 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 KRT36O76013 467 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 NDUFA7O95182 113 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 HIST1H1CP16403 213 aaKnown RBP9.64□□□□□ -0.87
COL6A3-213ENST00000493475 MDKP21741 143 aaPredicted RBP9.64□□□□□ -0.87
COL6A3-213ENST00000493475 PRDX6P30041 224 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 PSMB10P40306 273 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 DEFA6Q01524 100 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 MAB21L1Q13394 359 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 OCLNQ16625 522 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 MIDNQ504T8 468 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 PDLIM3Q53GG5 364 aaPredicted RBP9.64□□□□□ -0.87
COL6A3-213ENST00000493475 OTPQ5XKR4 325 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 OLFML2AQ68BL7 652 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 Q6YL49 198 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 CFAP77Q6ZQR2 320 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 SDR9C7Q8NEX9 313 aa9.64□□□□□ -0.87
COL6A3-213ENST00000493475 DYRK2Q92630 601 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms