RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	GATA4	P43694	442 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	GSS	P48637	474 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	PITPNB	P48739	271 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	IL13RA1	P78552	427 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	GK3P	Q14409	553 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	KRTAP27-1	Q3LI81	207 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	OR2T5	Q6IEZ7	315 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	ZNF770	Q6IQ21	691 aa	Predicted RBP	12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	SLC18B1	Q6NT16	456 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	LINC00471	Q8N535	108 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	CELF2-AS1	Q8N7Q2	184 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	PAPD5	Q8NDF8	572 aa	Known RBP	12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	OR11L1	Q8NGX0	322 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	OR2T29	Q8NH02	315 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	OR4K13	Q8NH42	304 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	ERGIC1	Q969X5	290 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	IFT27	Q9BW83	186 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	ZNF696	Q9H7X3	374 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	UNKL	Q9H9P5	680 aa	Known RBP	12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	RPRD1B	Q9NQG5	326 aa	Known RBP	12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	VNN3	Q9NY84	501 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	CLN8	Q9UBY8	286 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	TMCC3	Q9ULS5	477 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	NOP16	Q9Y3C1	178 aa	Known RBP	12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	MEGF8	Q7Z7M0	2845 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	TRRAP	Q9Y4A5	3859 aa		12.82	□□□□□ -0.36
MRPL55-231	ENST00000492170	TNFRSF11B	O00300	401 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	PHYH	O14832	338 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	OR10H3	O60404	316 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	PLAT	P00750	562 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	HLA-DQA2	P01906	255 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	LCAT	P04180	440 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	HLA-DPB1	P04440	258 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	IFNGR2	P38484	337 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	PMEL	P40967	661 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	GK2	Q14410	553 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	SLC9A3R2	Q15599	337 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	RSPO1	Q2MKA7	263 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	FAM201A	Q5SY85	155 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	PGBD2	Q6P3X8	592 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	DCDC5	Q6ZRR9	648 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	PGAP1	Q75T13	922 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	MRPL21	Q7Z2W9	205 aa	Known RBP	12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	ZBTB46	Q86UZ6	589 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170		Q8TCH9	128 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	SPRYD4	Q8WW59	207 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	DACT3	Q96B18	629 aa	Predicted RBP	12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	NUDT16L1	Q9BRJ7	211 aa	Known RBP	12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	CHID1	Q9BWS9	393 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	CYB5R1	Q9UHQ9	305 aa		12.81	□□□□□ -0.36
MRPL55-231	ENST00000492170	KIR2DS1	A0A191URI9	304 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	POM121C	A8CG34	1229 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	IDH3B	O43837	385 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	CD200	P41217	278 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	RAD23A	P54725	363 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	TPTE	P56180	551 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	PRSS12	P56730	875 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	TSPAN31	Q12999	210 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	MAB21L1	Q13394	359 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	SPATA24	Q86W54	205 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	SDR9C7	Q8NEX9	313 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	OR9Q2	Q8NGE9	314 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	SLCO4A1	Q96BD0	722 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	FN3K	Q9H479	309 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	REEP1	Q9H902	201 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	PNRC2	Q9NPJ4	139 aa	Known RBP	12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	KCNG2	Q9UJ96	466 aa		12.8	□□□□□ -0.36
MRPL55-231	ENST00000492170	PKD1L1	Q8TDX9	2849 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170		M0R135	149 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	ENSA	O43768	121 aa	Known RBP	12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	FAM20B	O75063	409 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	CCNB2	O95067	398 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	CST1	P01037	141 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	ZNF823	P16415	610 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	GGT2	P36268	569 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	CBX1	P83916	185 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	OR8G1	Q15617	311 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	KCNJ8	Q15842	424 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	WDR25	Q64LD2	544 aa	Predicted RBP	12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	ZNF620	Q6ZNG0	422 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	CCDC121	Q6ZUS5	278 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	GNPDA2	Q8TDQ7	276 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	SPTSSA	Q969W0	71 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	UTP4	Q969X6	686 aa	Known RBP	12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	ZNF799	Q96GE5	643 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	SLC22A4	Q9H015	551 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	UFSP2	Q9NUQ7	469 aa		12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	SAMHD1	Q9Y3Z3	626 aa	Known RBP	12.79	□□□□□ -0.36
MRPL55-231	ENST00000492170	DOCK11	Q5JSL3	2073 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	OR6C68	A6NDL8	312 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	ARRDC5	A6NEK1	342 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	EBAG9	O00559	213 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	FKBP6	O75344	327 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	NPY4R	P50391	375 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	FGF12	P61328	243 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	DBP	Q10586	325 aa	Predicted RBP	12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	PPP1R8	Q12972	351 aa	Known RBP	12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	MICA	Q29983	383 aa		12.78	□□□□□ -0.36
MRPL55-231	ENST00000492170	CLEC12A	Q5QGZ9	265 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms