RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 NOX4Q9NPH5 578 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 DCAF13Q9NV06 445 aaKnown RBP10.29□□□□□ -0.76
CPSF3-204ENST00000489403 MRPL22Q9NWU5 206 aaKnown RBP10.29□□□□□ -0.76
CPSF3-204ENST00000489403 C1RLQ9NZP8 487 aa10.29□□□□□ -0.76
CPSF3-204ENST00000489403 PDP1Q9P0J1 537 aaPredicted RBP10.29□□□□□ -0.76
CPSF3-204ENST00000489403 SAMD4AQ9UPU9 718 aaKnown RBP10.29□□□□□ -0.76
CPSF3-204ENST00000489403 CENPVL3A0A0U1RRI6 287 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 OR6C68A6NDL8 312 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 ZNF879B4DU55 563 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 C3orf80F5H4A9 247 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 M0R135 149 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 P2RY10O00398 339 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 TNFRSF13BO14836 293 aaPredicted RBP10.28□□□□□ -0.76
CPSF3-204ENST00000489403 CCDC22O60826 627 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 GADD45GO95257 159 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 PTBP3O95758 552 aaKnown RBP10.28□□□□□ -0.76
CPSF3-204ENST00000489403 HLA-DQA2P01906 255 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 SEMG1P04279 462 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 CRYBA1P05813 215 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 MELTFP08582 738 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 CA6P23280 308 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 RPS27P42677 84 aaKnown RBP10.28□□□□□ -0.76
CPSF3-204ENST00000489403 TPTEP56180 551 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 PSME3P61289 254 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 SPIBQ01892 262 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 ZNF92Q03936 586 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 ECH1Q13011 328 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 KRT72Q14CN4 511 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 OCLNQ16625 522 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 SNAI3Q3KNW1 292 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 OLFML2AQ68BL7 652 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 TMEM86BQ8N661 226 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 OR2AJ1Q8NGZ0 328 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 OR4F5Q8NH21 305 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 SPRYD4Q8WW59 207 aaPredicted RBP10.28□□□□□ -0.76
CPSF3-204ENST00000489403 ZNF799Q96GE5 643 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 MAP6Q96JE9 813 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 CITED1Q99966 193 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 IFT27Q9BW83 186 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 FN3KRPQ9HA64 309 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 SMURF1Q9HCE7 757 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 ERVK-18Q9QC07 812 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 RNF7Q9UBF6 113 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 V9GYQ6 96 aa10.28□□□□□ -0.76
CPSF3-204ENST00000489403 C5orf63A6NC05 138 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 CD300LBA8K4G0 201 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 LGALS8O00214 317 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 ADAM20O43506 726 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 GMDSO60547 372 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 FCN3O75636 299 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 TOX4O94842 621 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 NDUFA7O95182 113 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 LIPFP07098 398 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 PSKH1P11801 424 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 NOS3P29474 1203 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 KCNJ8Q15842 424 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 CD276Q5ZPR3 534 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 BRICD5Q6PL45 260 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 C17orf107Q6ZR85 190 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 BOLLQ8N9W6 283 aaKnown RBP10.27□□□□□ -0.77
CPSF3-204ENST00000489403 OR2AE1Q8NHA4 323 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 GATAD2BQ8WXI9 593 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 FAM71F1Q96KD3 344 aaPredicted RBP10.27□□□□□ -0.77
CPSF3-204ENST00000489403 WDFY2Q96P53 400 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 SLC22A4Q9H015 551 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 SPAG4Q9NPE6 437 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 NOP16Q9Y3C1 178 aaKnown RBP10.27□□□□□ -0.77
CPSF3-204ENST00000489403 POMT1Q9Y6A1 747 aa10.27□□□□□ -0.77
CPSF3-204ENST00000489403 PRKDCP78527 4128 aaKnown RBP10.26□□□□□ -0.77
CPSF3-204ENST00000489403 CLPSL1A2RUU4 121 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 OOEPA6NGQ2 149 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 OR10H3O60404 316 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 GYPAP02724 150 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 OTX1P32242 354 aaPredicted RBP10.26□□□□□ -0.77
CPSF3-204ENST00000489403 GSSP48637 474 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 SMIM11AP58511 58 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 KRTAP10-3P60369 221 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.26□□□□□ -0.77
CPSF3-204ENST00000489403 OR8B8Q15620 311 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 GLYATL3Q5SZD4 288 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 SLC35F1Q5T1Q4 408 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 METTL11BQ5VVY1 283 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 LYPD4Q6UWN0 246 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 ZNF620Q6ZNG0 422 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 GCSAMQ8N6F7 178 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 RNF148Q8N7C7 305 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 PLPP7Q8NBV4 271 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 SSMEM1Q8WWF3 244 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 ZNRF4Q8WWF5 429 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 SPTSSAQ969W0 71 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 PYURFQ96I23 114 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 SIRPDQ9H106 197 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 RASSF4Q9H2L5 321 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 GORASP2Q9H8Y8 452 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 TRIM36Q9NQ86 728 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 ACOXLQ9NUZ1 547 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 C1orf123Q9NWV4 160 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 KIF17Q9P2E2 1029 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 KCNG2Q9UJ96 466 aa10.26□□□□□ -0.77
CPSF3-204ENST00000489403 TRAV38-1A0A0B4J264 116 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms