RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 HDDC2Q7Z4H3 204 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 TSPYL5Q86VY4 417 aaPredicted RBP7.4□□□□□ -1.22
SSBP1-212ENST00000489378 PCYOX1LQ8NBM8 494 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 OR5AU1Q8NGC0 362 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 NFKBIDQ8NI38 313 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 TFAP2CQ92754 450 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 RASD2Q96D21 266 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 RBMXL1Q96E39 390 aaKnown RBP7.4□□□□□ -1.22
SSBP1-212ENST00000489378 MCHR1Q99705 422 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 MEGF9Q9H1U4 602 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 MUC13Q9H3R2 512 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 LIN7BQ9HAP6 207 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 KAAG1Q9UBP8 84 aa7.4□□□□□ -1.22
SSBP1-212ENST00000489378 ALMS1Q8TCU4 4167 aa7.4□□□□□ -1.23
SSBP1-212ENST00000489378 PLECQ15149 4684 aaKnown RBP7.4□□□□□ -1.23
SSBP1-212ENST00000489378 TCRBV4S1A1TA0A5B7 111 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 CPSF4LA6NMK7 179 aaKnown RBP7.39□□□□□ -1.23
SSBP1-212ENST00000489378 M0R3H8 397 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 ANP32DO95626 131 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 ZCCHC18P0CG32 403 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 BGNP21810 368 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 DGCR2P98153 550 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 SCRN3Q0VDG4 424 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 TOP3AQ13472 1001 aaPredicted RBP7.39□□□□□ -1.23
SSBP1-212ENST00000489378 PIN1Q13526 163 aaPredicted RBP7.39□□□□□ -1.23
SSBP1-212ENST00000489378 NPTX1Q15818 432 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 AANATQ16613 207 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 BEND6Q5SZJ8 279 aaPredicted RBP7.39□□□□□ -1.23
SSBP1-212ENST00000489378 TTC33Q6PID6 262 aaPredicted RBP7.39□□□□□ -1.23
SSBP1-212ENST00000489378 ZNF826PQ6ZT77 177 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 THNSL2Q86YJ6 484 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 FAM216BQ8N7L0 139 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 ZNF781Q8N8C0 355 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 ZNF583Q96ND8 569 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 RCHY1Q96PM5 261 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 CCL13Q99616 98 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 CPPED1Q9BRF8 314 aaPredicted RBP7.39□□□□□ -1.23
SSBP1-212ENST00000489378 GPR61Q9BZJ8 451 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 MEPEQ9NQ76 525 aaPredicted RBP7.39□□□□□ -1.23
SSBP1-212ENST00000489378 TRIM36Q9NQ86 728 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 POLE4Q9NR33 117 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 AIG1Q9NVV5 245 aa7.39□□□□□ -1.23
SSBP1-212ENST00000489378 TRBV23-1A0A0A0MS06 115 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 GMNCA6NCL1 334 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 OR6C6A6NF89 314 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 SYNGR1O43759 233 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 IFNW1P05000 195 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 SERPINE1P05121 402 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 FAM153BP0C7A2 387 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 CASQ1P31415 396 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 GUCA1AP43080 201 aaPredicted RBP7.38□□□□□ -1.23
SSBP1-212ENST00000489378 ENTPD8Q5MY95 495 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 NCR3LG1Q68D85 454 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 TMEM219Q86XT9 240 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 MRPL41Q8IXM3 137 aaKnown RBP7.38□□□□□ -1.23
SSBP1-212ENST00000489378 GCSAMQ8N6F7 178 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 OR5L1Q8NGL2 311 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 APOPT1Q96IL0 206 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 RBP7Q96R05 134 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 ZNF426Q9BUY5 554 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 ALG12Q9BV10 488 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 TXLNGYQ9BZA5 131 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 PRSS22Q9GZN4 317 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 RAD21L1Q9H4I0 556 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 C1orf123Q9NWV4 160 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 STX18Q9P2W9 335 aaKnown RBP7.38□□□□□ -1.23
SSBP1-212ENST00000489378 SLC7A7Q9UM01 511 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 CAPN7Q9Y6W3 813 aa7.38□□□□□ -1.23
SSBP1-212ENST00000489378 RBMY1BA6NDE4 496 aaKnown RBP7.37□□□□□ -1.23
SSBP1-212ENST00000489378 RBMY1EA6NEQ0 496 aaKnown RBP7.37□□□□□ -1.23
SSBP1-212ENST00000489378 OR7A10O76100 309 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 PTBP3O95758 552 aaKnown RBP7.37□□□□□ -1.23
SSBP1-212ENST00000489378 CLIC3O95833 236 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 RBMY1DP0C7P1 496 aaKnown RBP7.37□□□□□ -1.23
SSBP1-212ENST00000489378 NR2C1P13056 603 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 FUT1P19526 365 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 AQP1P29972 269 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 VDAC2P45880 294 aaPredicted RBP7.37□□□□□ -1.23
SSBP1-212ENST00000489378 RAB13P51153 203 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 BLCAPP62952 87 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 IKZF1Q13422 519 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 CNN3Q15417 329 aaKnown RBP7.37□□□□□ -1.23
SSBP1-212ENST00000489378 WDR38Q5JTN6 314 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 TEX36Q5VZQ5 186 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 REEP3Q6NUK4 255 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 ETV3LQ6ZN32 361 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 KRT73Q86Y46 540 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 RBM45Q8IUH3 476 aaKnown RBP7.37□□□□□ -1.23
SSBP1-212ENST00000489378 OR4D11Q8NGI4 311 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 OR6T1Q8NGN1 323 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 OR1F12Q8NHA8 337 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 PFN4Q8NHR9 129 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 EPS8L3Q8TE67 593 aaKnown RBP7.37□□□□□ -1.23
SSBP1-212ENST00000489378 MYDGFQ969H8 173 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 APOBEC3DQ96AK3 386 aaPredicted RBP7.37□□□□□ -1.23
SSBP1-212ENST00000489378 PRR25Q96S07 402 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 ZBTB18Q99592 522 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 SPATA5L1Q9BVQ7 753 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 TXNIPQ9H3M7 391 aa7.37□□□□□ -1.23
SSBP1-212ENST00000489378 SLC13A4Q9UKG4 626 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms