RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PRRG3Q9BZD7 231 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 MED4Q9NPJ6 270 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 ZNF331Q9NQX6 463 aaPredicted RBP2.82□□□□□ -1.96
XRN1-213ENST00000489241 RBMX2Q9Y388 322 aaKnown RBP2.82□□□□□ -1.96
XRN1-213ENST00000489241 SBNO1A3KN83 1393 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 NOTCH2Q04721 2471 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 IGHV3OR16-9A0A0B4J2B5 98 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 A0A0B4J2E0 115 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 IGHV5-51A0A0C4DH38 117 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 IGKV1-8A0A0C4DH67 115 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 A0A1B0GVX0 72 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 WI2-2373I1.2A0A1W2PRP0 233 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 PINLYPA6NC86 204 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 OR6C74A6NCV1 312 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 PDZK1P1A8MUH7 402 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 RRP8O43159 456 aaKnown RBP2.81□□□□□ -1.96
XRN1-213ENST00000489241 CDC40O60508 579 aaKnown RBP eCLIP2.81□□□□□ -1.96
XRN1-213ENST00000489241 VAPBO95292 243 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 GLAP06280 429 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 ADRB3P13945 408 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 CCNOP22674 350 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 HTR2CP28335 458 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 LCN1P31025 176 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 RBM34P42696 430 aaKnown RBP2.81□□□□□ -1.96
XRN1-213ENST00000489241 NDUFA8P51970 172 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 CDKN2DP55273 166 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 OR2B8PP59922 312 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 MECOMQ03112 1051 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 VAMP3Q15836 100 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 ATP6V1FQ16864 119 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 ORMDL2Q53FV1 153 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 C12orf56Q8IXR9 622 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 ST13P4Q8IZP2 240 aaPredicted RBP2.81□□□□□ -1.96
XRN1-213ENST00000489241 SLC34A3Q8N130 599 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 RNF175Q8N4F7 328 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 C15orf56Q8N910 161 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 PIFOQ8TCI5 191 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 ASZ1Q8WWH4 475 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 ZNF799Q96GE5 643 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 CENPNQ96H22 339 aaPredicted RBP2.81□□□□□ -1.96
XRN1-213ENST00000489241 CEP170P1Q96L14 293 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 BMFQ96LC9 184 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 ANKHQ9HCJ1 492 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 MYOZ1Q9NP98 299 aaPredicted RBP2.81□□□□□ -1.96
XRN1-213ENST00000489241 ZDHHC4Q9NPG8 344 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 ZNF302Q9NR11 478 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 FBXO8Q9NRD0 319 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 RGS18Q9NS28 235 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 STMN3Q9NZ72 180 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 GGA2Q9UJY4 613 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 CES1P1Q9UKY3 287 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 CFAP45Q9UL16 551 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 ZNF257Q9Y2Q1 563 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 PALLDQ8WX93 1383 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 AQRO60306 1485 aaKnown RBP eCLIP2.81□□□□□ -1.96
XRN1-213ENST00000489241 GTF3C1Q12789 2109 aa2.81□□□□□ -1.96
XRN1-213ENST00000489241 CROCCQ5TZA2 2017 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 TMEM94Q12767 1356 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 JCADQ9P266 1359 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 YKT6O15498 198 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 CTNSO60931 367 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 TRAPPC6AO75865 159 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 SEMA3DO95025 777 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 NPPAP01160 153 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 APOA1P02647 267 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 THRAP10827 490 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 CCL2P13500 99 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 CD70P32970 193 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 SSTR5P35346 364 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 SYNJ2BPP57105 145 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 SLC35B1P78383 322 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 ARG2P78540 354 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 RPL18AQ02543 176 aaKnown RBP2.8□□□□□ -1.96
XRN1-213ENST00000489241 MADCAM1Q13477 382 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 C18orf21Q32NC0 220 aaPredicted RBP2.8□□□□□ -1.96
XRN1-213ENST00000489241 AVPI1Q5T686 147 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 OR2T5Q6IEZ7 315 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 ZNF530Q6P9A1 599 aaPredicted RBP2.8□□□□□ -1.96
XRN1-213ENST00000489241 TMEM205Q6UW68 189 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 TMPRSS11AQ6ZMR5 421 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 SNX20Q7Z614 316 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 RAB43Q86YS6 212 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 MKXQ8IYA7 352 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 PRSS58Q8IYP2 241 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 DAW1Q8N136 415 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 SYS1Q8N2H4 156 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 OR6K6Q8NGW6 343 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 OR2T29Q8NH02 315 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 LILRB4Q8NHJ6 448 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 FAM104AQ969W3 186 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 EXOSC8Q96B26 276 aaKnown RBP2.8□□□□□ -1.96
XRN1-213ENST00000489241 TM4SF18Q96CE8 201 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 HAUS1Q96CS2 278 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 OR2A5Q96R48 311 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 OSBPL11Q9BXB4 747 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 RAB1BQ9H0U4 201 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 IFI27L2Q9H2X8 130 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 RPP21Q9H633 154 aaKnown RBP2.8□□□□□ -1.96
XRN1-213ENST00000489241 SYNDIG1Q9H7V2 258 aa2.8□□□□□ -1.96
XRN1-213ENST00000489241 CSNK1G1Q9HCP0 422 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms