RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ANKRD55Q3KP44 614 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 MTSS1LQ765P7 747 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 FAM213BQ8TBF2 198 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 TMEM184BQ9Y519 407 aaPredicted RBP14.49□□□□□ -0.09
MCF2L-229ENST00000488765 COL4A6Q14031 1691 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 GPR1P46091 355 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 RPL29P47914 159 aaKnown RBP14.49□□□□□ -0.09
MCF2L-229ENST00000488765 GABRA4P48169 554 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 SULT1A2P50226 295 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 LBX1P52954 281 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 POLR2LP62875 67 aaKnown RBP14.49□□□□□ -0.09
MCF2L-229ENST00000488765 SRSF5Q13243 272 aaKnown RBP14.49□□□□□ -0.09
MCF2L-229ENST00000488765 WDR38Q5JTN6 314 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 CARFQ8N187 725 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 SUMF2Q8NBJ7 301 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 EDAQ92838 391 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 ABHD14AQ9BUJ0 271 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 TMEM74BQ9NUR3 256 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 OR4C45A6NMZ5 311 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 C1QTNF3-AMACRE9PGA6 284 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 EIF1AYO14602 144 aaKnown RBP14.49□□□□□ -0.09
MCF2L-229ENST00000488765 ZNF205O95201 554 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 TIMP2P16035 220 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 CSRP1P21291 193 aaKnown RBP14.49□□□□□ -0.09
MCF2L-229ENST00000488765 BCL6P41182 706 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 EIF1AXP47813 144 aaKnown RBP14.49□□□□□ -0.09
MCF2L-229ENST00000488765 CLDN6P56747 220 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 FHL1Q13642 323 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 RPUSD3Q6P087 351 aaKnown RBP14.49□□□□□ -0.09
MCF2L-229ENST00000488765 CLEC18BQ6UXF7 455 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 TRAM1L1Q8N609 369 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 COX18Q8N8Q8 333 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 ZNF417Q8TAU3 575 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 RAB39BQ96DA2 213 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 TMEM208Q9BTX3 173 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 ICAM5Q9UMF0 924 aa14.49□□□□□ -0.09
MCF2L-229ENST00000488765 NOTCH4Q99466 2003 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 CDRT15L2A8MXV6 281 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 NDUFB2O95178 105 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 DUS4LO95620 317 aaKnown RBP14.48□□□□□ -0.09
MCF2L-229ENST00000488765 THBS1P07996 1170 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 CEBPBP17676 345 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 GLRA1P23415 457 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 HTR2CP28335 458 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 ASPHD2Q6ICH7 369 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 TMEM106CQ9BVX2 250 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 FBRSQ9HAH7 460 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 DUSP22Q9NRW4 184 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 XRCC2O43543 280 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 CSTBP04080 98 aaKnown RBP14.48□□□□□ -0.09
MCF2L-229ENST00000488765 TACSTD2P09758 323 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 GZMBP10144 247 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 GABRA3P34903 492 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 EMDP50402 254 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 CSNK1G2P78368 415 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 ELOBQ15370 118 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 TANGO2Q6ICL3 276 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 EIF5AL1Q6IS14 154 aaKnown RBP14.48□□□□□ -0.09
MCF2L-229ENST00000488765 LINC01555Q8NAE3 123 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 SLC2A12Q8TD20 617 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 MUCL1Q96DR8 90 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 MFRPQ9BY79 579 aa14.48□□□□□ -0.09
MCF2L-229ENST00000488765 DUSP15Q9H1R2 295 aaPredicted RBP14.48□□□□□ -0.09
MCF2L-229ENST00000488765 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.48□□□□□ -0.09
MCF2L-229ENST00000488765 IGKV1-8A0A0C4DH67 115 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 WIPF3A6NGB9 483 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 LYPD3O95274 346 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 C5AR1P21730 350 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 RPL12P30050 165 aaKnown RBP14.47□□□□□ -0.09
MCF2L-229ENST00000488765 S100A7P31151 101 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 ADIPOR2Q86V24 386 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 STACQ99469 402 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 PRRT1Q99946 306 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 FAM221BA6H8Z2 402 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 OTOL1A6NHN0 477 aaPredicted RBP14.47□□□□□ -0.09
MCF2L-229ENST00000488765 H3BQ15 152 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 K7EPK0 472 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 PNPP00491 289 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 OR4A8P0C604 315 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 IGFALSP35858 605 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 TSPAN7P41732 249 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 ZNF880Q6PDB4 577 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 BTNL3Q6UXE8 466 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 FAM71E2Q8N5Q1 922 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 MRPL43Q8N983 215 aaKnown RBP14.47□□□□□ -0.09
MCF2L-229ENST00000488765 OR4N2Q8NGD1 307 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 SFXN5Q8TD22 340 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 LPAR4Q99677 370 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 MENTQ9BUN1 341 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 SLC35B3Q9H1N7 401 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 B9D1Q9UPM9 204 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 SPEM2Q0P670 501 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 PTCRAQ6ISU1 281 aaPredicted RBP14.47□□□□□ -0.09
MCF2L-229ENST00000488765 PRSS54Q6PEW0 395 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 GALNT14Q96FL9 552 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 NDUFAF3Q9BU61 184 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 LMAN1LQ9HAT1 526 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 PADI1Q9ULC6 663 aa14.47□□□□□ -0.09
MCF2L-229ENST00000488765 TRANK1O15050 2925 aa14.46□□□□□ -0.09
MCF2L-229ENST00000488765 DOCK9Q9BZ29 2069 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms