RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 SF3B4Q15427 424 aaKnown RBP eCLIP11.12□□□□□ -0.63
NELFE-209ENST00000488426 SMUG1Q53HV7 270 aa11.12□□□□□ -0.63
NELFE-209ENST00000488426 METAP1DQ6UB28 335 aaPredicted RBP11.12□□□□□ -0.63
NELFE-209ENST00000488426 SLC16A14Q7RTX9 510 aa11.12□□□□□ -0.63
NELFE-209ENST00000488426 FGD2Q7Z6J4 655 aa11.12□□□□□ -0.63
NELFE-209ENST00000488426 LRRC28Q86X40 367 aaPredicted RBP11.12□□□□□ -0.63
NELFE-209ENST00000488426 ORAI1Q96D31 301 aa11.12□□□□□ -0.63
NELFE-209ENST00000488426 DIRAS2Q96HU8 199 aa11.12□□□□□ -0.63
NELFE-209ENST00000488426 CCDC32Q9BV29 185 aa11.12□□□□□ -0.63
NELFE-209ENST00000488426 MALT1Q9UDY8 824 aa11.12□□□□□ -0.63
NELFE-209ENST00000488426 A0A1B0GVI7 797 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 ANXA2P2A6NMY6 339 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 SYT7O43581 403 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 SYNGR3O43761 229 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 DOK2O60496 412 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 UPK1BO75841 260 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 ANXA2P07355 339 aaKnown RBP11.11□□□□□ -0.63
NELFE-209ENST00000488426 ZNF32P17041 273 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 ATF1P18846 271 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 PTBP1P26599 531 aaKnown RBP eCLIP11.11□□□□□ -0.63
NELFE-209ENST00000488426 CFPP27918 469 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 OR3A2P47893 321 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 ARPC4P59998 168 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 ARF1P84077 181 aaKnown RBP11.11□□□□□ -0.63
NELFE-209ENST00000488426 ZNF181Q2M3W8 571 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 C4orf17Q53FE4 359 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 PRSS45Q7RTY3 260 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 LUZP2Q86TE4 346 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 SKA3Q8IX90 412 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 ZNF433Q8N7K0 673 aaPredicted RBP11.11□□□□□ -0.63
NELFE-209ENST00000488426 OR8B12Q8NGG6 310 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 TRMT10AQ8TBZ6 339 aaKnown RBP11.11□□□□□ -0.63
NELFE-209ENST00000488426 WNT2BQ93097 391 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 TRIB1Q96RU8 372 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 GFI1Q99684 422 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 SLC17A5Q9NRA2 495 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 ATPIF1Q9UII2 106 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 SH3BGRL2Q9UJC5 107 aa11.11□□□□□ -0.63
NELFE-209ENST00000488426 OR6C6A6NF89 314 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 FABP12A6NFH5 140 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 H3BSH0 61 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 M0R135 149 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 SLC2A2P11168 524 aaPredicted RBP11.1□□□□□ -0.63
NELFE-209ENST00000488426 ZNF12P17014 697 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 IGFBP3P17936 291 aaPredicted RBP11.1□□□□□ -0.63
NELFE-209ENST00000488426 ADRA2CP18825 462 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 CCL1P22362 96 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 CRYGSP22914 178 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 EVX1P49640 407 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 GALK2Q01415 458 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 GUSBP1Q15486 140 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 SLC36A2Q495M3 483 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 FBXW9Q5XUX1 488 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 ZNF787Q6DD87 383 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 OR2A2Q6IF42 318 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 DRAM2Q6UX65 266 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 FAM131AQ6UXB0 335 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 UBE2J2Q8N2K1 259 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 OR1F12Q8NHA8 337 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 ZNF799Q96GE5 643 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 CMTM3Q96MX0 182 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 GPR137Q96N19 417 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 OR2H1Q9GZK4 316 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 ZNF275Q9NSD4 429 aaPredicted RBP11.1□□□□□ -0.63
NELFE-209ENST00000488426 A0A0U1RQV5 110 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 A0A1B0GTI1 187 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 ISPDA4D126 451 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 MEGF11A6BM72 1044 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 F5H5K5 113 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 MMP7P09237 267 aaPredicted RBP11.1□□□□□ -0.63
NELFE-209ENST00000488426 MPGP29372 298 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 TPTEP56180 551 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 SCAND1P57086 179 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 PSG4Q00888 419 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 FAPQ12884 760 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 RSPO1Q2MKA7 263 aaPredicted RBP11.1□□□□□ -0.63
NELFE-209ENST00000488426 KRTAP27-1Q3LI81 207 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 ACSF3Q4G176 576 aaPredicted RBP11.1□□□□□ -0.63
NELFE-209ENST00000488426 KRTCAP3Q53RY4 240 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 CNIH2Q6PI25 160 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 XKRXQ6PP77 449 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 FAM57BQ71RH2 274 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 DOK3Q7L591 496 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 FAM214BQ7L5A3 538 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 CSMD2Q7Z408 3487 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 DPPA2Q7Z7J5 298 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 MED12LQ86YW9 2145 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 CCDC54Q8NEL0 328 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 OR51E1Q8TCB6 317 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 PGAM5Q96HS1 289 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 SOSTQ9BQB4 213 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 WNT5BQ9H1J7 359 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 SP140LQ9H930 580 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 CYSLTR2Q9NS75 346 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 SPATA2Q9UM82 520 aa11.1□□□□□ -0.63
NELFE-209ENST00000488426 TRGV8A0A0C4DH27 118 aa11.09□□□□□ -0.63
NELFE-209ENST00000488426 IGLV3-1P01715 115 aa11.09□□□□□ -0.63
NELFE-209ENST00000488426 APOA1P02647 267 aa11.09□□□□□ -0.63
NELFE-209ENST00000488426 MAS1P04201 325 aa11.09□□□□□ -0.63
NELFE-209ENST00000488426 CALCBP10092 127 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms