RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 TPRX1Q8N7U7 411 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 TBCKQ8TEA7 893 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 LRRC45Q96CN5 670 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 CCDC126Q96EE4 140 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 SIGLEC12Q96PQ1 595 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 KCNA7Q96RP8 456 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 HSD17B14Q9BPX1 270 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 ECSITQ9BQ95 431 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 TMEM246Q9BRR3 403 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 MED10Q9BTT4 135 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 PRRG3Q9BZD7 231 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 NAT10Q9H0A0 1025 aaKnown RBP2.64□□□□□ -1.99
UBR3-211ENST00000487689 PSTPIP2Q9H939 334 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 PLEKHA3Q9HB20 300 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 LY9Q9HBG7 655 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 MRPL47Q9HD33 250 aaKnown RBP2.64□□□□□ -1.99
UBR3-211ENST00000487689 ESM1Q9NQ30 184 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 SDHAF3Q9NRP4 125 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 RBAKQ9NYW8 714 aaPredicted RBP2.64□□□□□ -1.99
UBR3-211ENST00000487689 DHRS4-AS1Q9P1J3 65 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 ARMCX1Q9P291 453 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 ZNF229Q9UJW7 825 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 PLXND1Q9Y4D7 1925 aa2.64□□□□□ -1.99
UBR3-211ENST00000487689 AKAP6Q13023 2319 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 IGHV1OR15-9A0A0B4J2B8 117 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 IGKV6-21A0A0C4DH24 114 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 A0A1W2PRF3 423 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 A0A1W2PRM7 423 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 MGAT4DA6NG13 374 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 IDSB3KWA1 339 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 E7ESA3 106 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 H3BMQ9 156 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 SIVA1O15304 175 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 RAD51BO15315 384 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 SCN2BO60939 215 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 ZNF253O75346 499 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 CIAO1O76071 339 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 MYO1DO94832 1006 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 SCELO95171 688 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 VENTXO95231 258 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 LCA5LO95447 670 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 SEMA4FO95754 770 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 FADS2O95864 444 aaKnown RBP2.63□□□□□ -1.99
UBR3-211ENST00000487689 CST4P01036 141 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 IGHG1P01857 330 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 RPN2P04844 631 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 IFNW1P05000 195 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 FASP25445 335 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 GABRR2P28476 465 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 IL12AP29459 219 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 FGF9P31371 208 aaPredicted RBP2.63□□□□□ -1.99
UBR3-211ENST00000487689 CFHR2P36980 270 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 SLC26A3P40879 764 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 CSKP41240 450 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 SLC1A2P43004 574 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 HAAOP46952 286 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 TMED10P49755 219 aaKnown RBP2.63□□□□□ -1.99
UBR3-211ENST00000487689 DAP3P51398 398 aaKnown RBP2.63□□□□□ -1.99
UBR3-211ENST00000487689 CCNHP51946 323 aaPredicted RBP2.63□□□□□ -1.99
UBR3-211ENST00000487689 RPL8P62917 257 aaKnown RBP2.63□□□□□ -1.99
UBR3-211ENST00000487689 ADARB1P78563 741 aaKnown RBP2.63□□□□□ -1.99
UBR3-211ENST00000487689 STX3Q13277 289 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 LTB4RQ15722 352 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 ISXQ2M1V0 245 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 TRIM16LQ309B1 348 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 PGGHGQ32M88 737 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 CNPY1Q3B7I2 92 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 PAN3Q58A45 887 aaKnown RBP2.63□□□□□ -1.99
UBR3-211ENST00000487689 LY6G6FQ5SQ64 297 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 ZNF470Q6ECI4 717 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 APOOLQ6UXV4 268 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 ZNF600Q6ZNG1 722 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 FAM122BQ7Z309 247 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 PLCZ1Q86YW0 608 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 KRT222Q8N1A0 295 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 OR2L13Q8N349 312 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 ATP6V0D2Q8N8Y2 350 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 OR10H4Q8NGA5 316 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 OR52E5Q8NH55 327 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 TCTEX1D2Q8WW35 142 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 NDRG1Q92597 394 aaKnown RBP2.63□□□□□ -1.99
UBR3-211ENST00000487689 UFD1Q92890 307 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 DNAJA3Q96EY1 480 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 TSSK3Q96PN8 268 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 TAAR1Q96RJ0 339 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 RNF2Q99496 336 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 ATP5SQ99766 215 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 SH3GL1Q99961 368 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 ZNF670Q9BS34 389 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 DEFB126Q9BYW3 111 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 PLA2G12AQ9BZM1 189 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 PPDPFQ9H3Y8 114 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 SAV1Q9H4B6 383 aaPredicted RBP2.63□□□□□ -1.99
UBR3-211ENST00000487689 GLIPR2Q9H4G4 154 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 REEP4Q9H6H4 257 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 LRRC19Q9H756 370 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 UCK1Q9HA47 277 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 ELL3Q9HB65 397 aaPredicted RBP2.63□□□□□ -1.99
UBR3-211ENST00000487689 VCX3AQ9NNX9 186 aa2.63□□□□□ -1.99
UBR3-211ENST00000487689 EURLQ9NYK6 297 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms