RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	CX3CR1	P49238	355 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	GDI2	P50395	445 aa	Known RBP	6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZNF83	P51522	516 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	GBX2	P52951	348 aa	Predicted RBP	6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	WNT4	P56705	351 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	TAS2R43	P59537	309 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	MRPL28	Q13084	256 aa	Known RBP	6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	RAB39A	Q14964	217 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	CDSN	Q15517	529 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	TAB1	Q15750	504 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	NEDD8	Q15843	81 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	TBC1D28	Q2M2D7	210 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	CCDC92	Q53HC0	331 aa	Predicted RBP	6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	LCE5A	Q5TCM9	118 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	OR2G6	Q5TZ20	316 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZNF544	Q6NX49	715 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	DEGS2	Q6QHC5	323 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZNF679	Q8IYX0	411 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	SPART	Q8N0X7	666 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZNF283	Q8N7M2	679 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	SLC30A7	Q8NEW0	376 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	OR10S1	Q8NGN2	331 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	HAVCR2	Q8TDQ0	301 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	HSD17B8	Q92506	261 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZC3HAV1L	Q96H79	300 aa	Known RBP	6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	DOK1	Q99704	481 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	KCNS3	Q9BQ31	491 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	NIPAL2	Q9H841	368 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	MOB1A	Q9H8S9	216 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	ELOVL3	Q9HB03	270 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	CDH20	Q9HBT6	801 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	NGB	Q9NPG2	151 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	PNRC2	Q9NPJ4	139 aa	Known RBP	6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	B3GNT2	Q9NY97	397 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	NDRG3	Q9UGV2	375 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	CLEC2D	Q9UHP7	191 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	MRM2	Q9UI43	246 aa	Known RBP	6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	SCOC	Q9UIL1	159 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	ALPK2	Q86TB3	2170 aa		6.64	□□□□□ -1.35
GARNL3-218	ENST00000487565	TRBV23-1	A0A0A0MS06	115 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	C5orf49	A4QMS7	147 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	LOC110117498-PIK3R3	F6TDL0	507 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565		M0R135	149 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565		M0R1B8	84 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	MAGEB4	O15481	346 aa	Predicted RBP	6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	RPP14	O95059	124 aa	Known RBP	6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	PLAT	P00750	562 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	APOC1	P02654	83 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	SERPINA5	P05154	406 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	ANXA2	P07355	339 aa	Known RBP	6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	TACSTD2	P09758	323 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZNF14	P17017	642 aa	Predicted RBP	6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	CRYGS	P22914	178 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	STOM	P27105	288 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	APEX1	P27695	318 aa	Known RBP	6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	PEX19	P40855	299 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	PRKX	P51817	358 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	TPTE	P56180	551 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	OR12D2	P58182	307 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	GALK2	Q01415	458 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	TFF3	Q07654	80 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	NCOA6	Q14686	2063 aa	Predicted RBP	6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	SPHAR	Q15513	63 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	MED22	Q15528	200 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZNF684	Q5T5D7	378 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	BCL2L15	Q5TBC7	163 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	KCTD8	Q6ZWB6	473 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	RHOU	Q7L0Q8	258 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	KCTD20	Q7Z5Y7	419 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	KLB	Q86Z14	1044 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	NANOGP1	Q8N7R0	232 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	OR1J2	Q8NGS2	313 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	SSC4D	Q8WTU2	575 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	SPRYD4	Q8WW59	207 aa	Predicted RBP	6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	RORB	Q92753	470 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZNF799	Q96GE5	643 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	ZNF649	Q9BS31	505 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	C1QTNF6	Q9BXI9	259 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	ACOT13	Q9NPJ3	140 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	NPAP1	Q9NZP6	1156 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	CRNN	Q9UBG3	495 aa	Predicted RBP	6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	LSM2	Q9Y333	95 aa	Known RBP	6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565		R4GMQ9	66 aa		6.63	□□□□□ -1.35
GARNL3-218	ENST00000487565	IGHV1-18	A0A0C4DH31	117 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	TUBAL3	A6NHL2	446 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565		F5H5K5	113 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	CLPTM1	O96005	669 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	IGKV3-15	P01624	115 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	IGLV1-44	P01699	117 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	LCK	P06239	509 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	ACSM4	P0C7M7	580 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	CECR9	P0C854	216 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	HSMCR30	P0CW71	290 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	SLC2A1	P11166	492 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	FAH	P16930	419 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	CCNO	P22674	350 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	OTX1	P32242	354 aa	Predicted RBP	6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	DCTD	P32321	178 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	PSMB10	P40306	273 aa		6.62	□□□□□ -1.35
GARNL3-218	ENST00000487565	RGS6	P49758	472 aa		6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms