RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 IFT22Q9H7X7 185 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 LPAR3Q9UBY5 353 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 ATPIF1Q9UII2 106 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 ANAPC10Q9UM13 185 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 GPR132Q9UNW8 380 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 COL5A1P20908 1838 aaPredicted RBP10.85□□□□□ -0.67
COL3A1-206ENST00000487010 IGHV5-51A0A0C4DH38 117 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 MSGN1A6NI15 193 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 ZNF705EA8MWA4 302 aaPredicted RBP10.85□□□□□ -0.67
COL3A1-206ENST00000487010 NPIPA5E9PKD4 350 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 SFT2D2O95562 160 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 HEXAP06865 529 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 CHRM2P08172 466 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 HOXB1P14653 301 aaPredicted RBP10.85□□□□□ -0.67
COL3A1-206ENST00000487010 ABOP16442 354 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 ABCD3P28288 659 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 EMP2P54851 167 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 CLDN6P56747 220 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 ZP4Q12836 540 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 ELAVL1Q15717 326 aaKnown RBP10.85□□□□□ -0.67
COL3A1-206ENST00000487010 AWAT2Q6E213 333 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 ZNF529Q6P280 563 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 PRSS54Q6PEW0 395 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 C5orf46Q6UWT4 87 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 COX15Q7KZN9 410 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 DMBX1Q8NFW5 382 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 GLYATL2Q8WU03 294 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.85□□□□□ -0.67
COL3A1-206ENST00000487010 TMEM230Q96A57 120 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 KCNK17Q96T54 332 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 CDCA3Q99618 268 aaPredicted RBP10.85□□□□□ -0.67
COL3A1-206ENST00000487010 NICN1Q9BSH3 213 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 LRRC61Q9BV99 259 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 FOXQ1Q9C009 403 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 PBOV1Q9GZY1 135 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 C5orf66Q9H5L9 145 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 PDE7BQ9NP56 450 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 RAB18Q9NP72 206 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 ACKR4Q9NPB9 350 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 GPR27Q9NS67 375 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 CTSFQ9UBX1 484 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 NPIPA1Q9UND3 350 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 A0A0A6YYD4 124 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 CEACAM18A8MTB9 384 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 ADAP1O75689 374 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 DAP3P51398 398 aaKnown RBP10.85□□□□□ -0.67
COL3A1-206ENST00000487010 VAX1Q5SQQ9 334 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 ZNF585AQ6P3V2 769 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 KLHL24Q6TFL4 600 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 CLEC18BQ6UXF7 455 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 TTLL10Q6ZVT0 673 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 OR13C9Q8NGT0 318 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 TGM7Q96PF1 710 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 AQP10Q96PS8 301 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 USB1Q9BQ65 265 aaKnown RBP10.85□□□□□ -0.67
COL3A1-206ENST00000487010 NRIP2Q9BQI9 281 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 WWTR1Q9GZV5 400 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 LPAR5Q9H1C0 372 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 OR5AC2Q9NZP5 309 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 RCC2Q9P258 522 aaKnown RBP10.85□□□□□ -0.67
COL3A1-206ENST00000487010 LHX6Q9UPM6 363 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 FLVCR1Q9Y5Y0 555 aa10.85□□□□□ -0.67
COL3A1-206ENST00000487010 ARID1BQ8NFD5 2236 aaPredicted RBP10.84□□□□□ -0.67
COL3A1-206ENST00000487010 TRANK1O15050 2925 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 CRYBA1P05813 215 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 GSTP1P09211 210 aaKnown RBP10.84□□□□□ -0.67
COL3A1-206ENST00000487010 DRD1P21728 446 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 ZNF93P35789 620 aaPredicted RBP10.84□□□□□ -0.67
COL3A1-206ENST00000487010 NPY4RP50391 375 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 BLKP51451 505 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 EFNA3P52797 238 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 GFERP55789 205 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 SLC9A3R2Q15599 337 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 GFOD2Q3B7J2 385 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 ACTBL2Q562R1 376 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 AVPI1Q5T686 147 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 KIAA0895LQ68EN5 471 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 C7orf61Q8IZ16 206 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 ZNF101Q8IZC7 436 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 ARRDC1Q8N5I2 433 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 BHLHE23Q8NDY6 225 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 RXFP4Q8TDU9 374 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 ADAMTS17Q8TE56 1095 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 SLAMF6Q96DU3 332 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 SAT2Q96F10 170 aaPredicted RBP10.84□□□□□ -0.67
COL3A1-206ENST00000487010 SMIM8Q96KF7 97 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 RHOFQ9HBH0 211 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 CUTCQ9NTM9 273 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 FAM96BQ9Y3D0 163 aa10.84□□□□□ -0.67
COL3A1-206ENST00000487010 USP34Q70CQ2 3546 aa10.83□□□□□ -0.67
COL3A1-206ENST00000487010 MEX3AA1L020 520 aaKnown RBP10.83□□□□□ -0.68
COL3A1-206ENST00000487010 MBTPS2O43462 519 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 SPP1P10451 314 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 MUC1P15941 1255 aaPredicted RBP10.83□□□□□ -0.68
COL3A1-206ENST00000487010 NFYBP25208 207 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 FASLGP48023 281 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 PPM1FP49593 454 aaPredicted RBP10.83□□□□□ -0.68
COL3A1-206ENST00000487010 CAV2P51636 162 aa10.83□□□□□ -0.68
COL3A1-206ENST00000487010 CCR5P51681 352 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms