RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 RTN4RQ9BZR6 473 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 PPA2Q9H2U2 334 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 BET1O15155 118 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 ZNHIT1O43257 154 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 SCGNO76038 276 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 VAMP5O95183 116 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 CEACAM16Q2WEN9 425 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 KLHDC3Q9BQ90 382 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 AIFM2Q9BRQ8 373 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 EDEM2Q9BV94 578 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF416Q9BWM5 594 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 CDH20Q9HBT6 801 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 FBXO4Q9UKT5 387 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 FREM3P0C091 2139 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 RALGAPA1Q6GYQ0 2036 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 CNOT4O95628 575 aaKnown RBP11.81□□□□□ -0.52
HMGN1-216ENST00000486741 TRAPPC2P0DI81 140 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 TRAPPC2BP0DI82 140 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 AGTR1P30556 359 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 EFNB2P52799 333 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 GRB2P62993 217 aaKnown RBP11.81□□□□□ -0.52
HMGN1-216ENST00000486741 MRPL49Q13405 166 aaKnown RBP11.81□□□□□ -0.52
HMGN1-216ENST00000486741 DYRK1AQ13627 763 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 ACER2Q5QJU3 275 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 HAGHLQ6PII5 290 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-216ENST00000486741 STX12Q86Y82 276 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 CARFQ8N187 725 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 LIPHQ8WWY8 451 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 DNASE2BQ8WZ79 361 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 LIN37Q96GY3 246 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-216ENST00000486741 SDHCQ99643 169 aaPredicted RBP11.81□□□□□ -0.52
HMGN1-216ENST00000486741 METTL9Q9H1A3 318 aa11.81□□□□□ -0.52
HMGN1-216ENST00000486741 LIPT2A6NK58 231 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 H3BUI4 141 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 H7C417 338 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 AGPAT2O15120 278 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 ATP1B3P54709 279 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 PCK2Q16822 640 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 TIGD3Q6B0B8 471 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 DOK3Q7L591 496 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 PDZD9Q8IXQ8 264 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF700Q9H0M5 742 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 A0A087WV48 116 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 H3BMH7 237 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 CXCL3P19876 107 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 GALNSP34059 522 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 HRH1P35367 487 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 PCBD1P61457 104 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 SPEM2Q0P670 501 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 CNN3Q15417 329 aaKnown RBP11.8□□□□□ -0.52
HMGN1-216ENST00000486741 SULF2Q8IWU5 870 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 MARVELD1Q9BSK0 173 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 A0A1W2PQD3 144 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 GLSO94925 669 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-216ENST00000486741 SLC6A1P30531 599 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 FGL1Q08830 312 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 MN1Q10571 1320 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-216ENST00000486741 TMEM272A0A1B0GTI8 110 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 IGKV3-11P04433 115 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 ACSM4P0C7M7 580 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 DSCR4P56555 118 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-216ENST00000486741 RIPPLY1Q0D2K3 151 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 PGAP1Q75T13 922 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 SGPP2Q8IWX5 399 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 SEMA6DQ8NFY4 1073 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 ZFAND1Q8TCF1 268 aa11.8□□□□□ -0.52
HMGN1-216ENST00000486741 HELZP42694 1942 aaKnown RBP11.79□□□□□ -0.52
HMGN1-216ENST00000486741 CTAG2O75638 210 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 DIRAS3O95661 229 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 PNPP00491 289 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF362Q5T0B9 420 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-216ENST00000486741 SIGIRRQ6IA17 410 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 CD200R1LQ6Q8B3 271 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 UNQ6126/PRO20091Q6UXV3 157 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 MRGPREQ86SM8 312 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF687Q8N1G0 1237 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 OR2Y1Q8NGV0 311 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 ASB10Q8WXI3 467 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 UQCC2Q9BRT2 126 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 PIN1P1O15428 100 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 CFHR1Q03591 330 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 BPHLQ86WA6 291 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-216ENST00000486741 OR5AS1Q8N127 324 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 GVQW1Q8N7I0 195 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 SAP25Q8TEE9 199 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 TANC1Q9C0D5 1861 aa11.79□□□□□ -0.52
HMGN1-216ENST00000486741 TOX3O15405 576 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-216ENST00000486741 SPRY1O43609 319 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF587BE7ETH6 402 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 HPXP02790 462 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 PDGFAP04085 211 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 PNLIPP16233 465 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 CPT2P23786 658 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 IGLV3-21P80748 117 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-216ENST00000486741 ZNF684Q5T5D7 378 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 BRICD5Q6PL45 260 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 MKXQ8IYA7 352 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 OR11G2Q8NGC1 345 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 MAP6Q96JE9 813 aa11.78□□□□□ -0.52
HMGN1-216ENST00000486741 DOCK7Q96N67 2140 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms