RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ERVFRD-1P60508 538 aa12.16□□□□□ -0.46
U2AF1-211ENST00000486519 IL5RAQ01344 420 aa12.16□□□□□ -0.46
U2AF1-211ENST00000486519 LDLRAD2Q5SZI1 272 aa12.16□□□□□ -0.46
U2AF1-211ENST00000486519 HDDC2Q7Z4H3 204 aa12.16□□□□□ -0.46
U2AF1-211ENST00000486519 NAA40Q86UY6 237 aa12.16□□□□□ -0.46
U2AF1-211ENST00000486519 OR5T2Q8NGG2 359 aa12.16□□□□□ -0.46
U2AF1-211ENST00000486519 LRRC8CQ8TDW0 803 aa12.16□□□□□ -0.46
U2AF1-211ENST00000486519 APOBEC3DQ96AK3 386 aaPredicted RBP12.16□□□□□ -0.46
U2AF1-211ENST00000486519 PAIP1Q9H074 479 aaKnown RBP12.16□□□□□ -0.46
U2AF1-211ENST00000486519 METTL8Q9H825 291 aaKnown RBP12.16□□□□□ -0.46
U2AF1-211ENST00000486519 THUMPD1Q9NXG2 353 aaKnown RBP12.16□□□□□ -0.46
U2AF1-211ENST00000486519 SF3B6Q9Y3B4 125 aaKnown RBP12.16□□□□□ -0.46
U2AF1-211ENST00000486519 hCG_1807616A0A1W2PRN6 198 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 A6NLC8 198 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 CLIC1O00299 241 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 SLC22A3O75751 556 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 CLIC3O95833 236 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 THBS3P49746 956 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 WDR86Q86TI4 376 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 MSRB3Q8IXL7 192 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 C11orf53Q8IXP5 236 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 MKXQ8IYA7 352 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 CNPY4Q8N129 248 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 DUS3LQ96G46 650 aaKnown RBP12.15□□□□□ -0.46
U2AF1-211ENST00000486519 PKNOX2Q96KN3 472 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 RBP7Q96R05 134 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 ZNF649Q9BS31 505 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 ADAT1Q9BUB4 502 aaKnown RBP12.15□□□□□ -0.46
U2AF1-211ENST00000486519 SLC25A37Q9NYZ2 338 aa12.15□□□□□ -0.46
U2AF1-211ENST00000486519 M0R1W7 72 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 IMPA2O14732 288 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 TGM4P49221 684 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 CDK6Q00534 326 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 DUSP7Q16829 419 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 OGFOD2Q6N063 350 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 REEP3Q6NUK4 255 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 OVCH2Q7RTZ1 564 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 CENPVQ7Z7K6 275 aaPredicted RBP12.14□□□□□ -0.47
U2AF1-211ENST00000486519 NKAIN4Q8IVV8 208 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 DTX3Q8N9I9 347 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 LRRC75AQ8NAA5 344 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 OR5L1Q8NGL2 311 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 ACOT11Q8WXI4 607 aaPredicted RBP12.14□□□□□ -0.47
U2AF1-211ENST00000486519 SLCO4A1Q96BD0 722 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 DUX3Q96PT4 197 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 SORT1Q99523 831 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 EDA2RQ9HAV5 297 aa12.14□□□□□ -0.47
U2AF1-211ENST00000486519 GMNCA6NCL1 334 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 NPIPB13A6NJU9 1138 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 NPIPB4C9JG80 1138 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 J3QW42 95 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 SDHDO14521 159 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 NDUFB3O43676 98 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 BPGMP07738 259 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 CASQ1P31415 396 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 RPL27P61353 136 aaKnown RBP12.13□□□□□ -0.47
U2AF1-211ENST00000486519 ECH1Q13011 328 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 DGUOKQ16854 277 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 C6orf10Q5SRN2 563 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 GCNT6Q5T4J0 391 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 SLC2A7Q6PXP3 512 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 UNQ9370/PRO34162Q6UXP9 181 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 C17orf53Q8N3J3 647 aaPredicted RBP12.13□□□□□ -0.47
U2AF1-211ENST00000486519 OR9I1Q8NGQ6 314 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 TMEM255BQ8WV15 326 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 LRRC29Q8WV35 223 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 DMRTB1Q96MA1 342 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 HCAR1Q9BXC0 346 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 IKZF5Q9H5V7 419 aa12.13□□□□□ -0.47
U2AF1-211ENST00000486519 STX18Q9P2W9 335 aaKnown RBP12.13□□□□□ -0.47
U2AF1-211ENST00000486519 TRAPPC13A5PLN9 417 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 SH2D7A6NKC9 451 aaPredicted RBP12.12□□□□□ -0.47
U2AF1-211ENST00000486519 VGLL3A8MV65 326 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 RAMP3O60896 148 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 MT-ND1P03886 318 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 COX7A1P24310 79 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 ECI1P42126 302 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 GUCA1AP43080 201 aaPredicted RBP12.12□□□□□ -0.47
U2AF1-211ENST00000486519 AQP6Q13520 282 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 RABL3Q5HYI8 236 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 C8orf86Q6ZUL3 223 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 KRT73Q86Y46 540 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 ARMC8Q8IUR7 673 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 GTF2H4Q92759 462 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 ITCHQ96J02 903 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 SPATA5L1Q9BVQ7 753 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 GRPEL1Q9HAV7 217 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 SNTG1Q9NSN8 517 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 PNPOQ9NVS9 261 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 SLAMF8Q9P0V8 285 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 SLC13A4Q9UKG4 626 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 ABCA13Q86UQ4 5058 aa12.12□□□□□ -0.47
U2AF1-211ENST00000486519 A0A1W2PQ09 198 aa12.11□□□□□ -0.47
U2AF1-211ENST00000486519 SNRNP70P08621 437 aaKnown RBP12.11□□□□□ -0.47
U2AF1-211ENST00000486519 CTLA4P16410 223 aa12.11□□□□□ -0.47
U2AF1-211ENST00000486519 GMFBP60983 142 aa12.11□□□□□ -0.47
U2AF1-211ENST00000486519 CSNK2BP67870 215 aa12.11□□□□□ -0.47
U2AF1-211ENST00000486519 FADDQ13158 208 aa12.11□□□□□ -0.47
U2AF1-211ENST00000486519 SCARB2Q14108 478 aa12.11□□□□□ -0.47
U2AF1-211ENST00000486519 MICBQ29980 383 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms