RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ZNF570Q96NI8 536 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 GPX7Q96SL4 187 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-227ENST00000485102 COQ7Q99807 217 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 OSBPL10Q9BXB5 764 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 CHIAQ9BZP6 476 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 HDHD2Q9H0R4 259 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 NRIP3Q9NQ35 241 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 TMEM100Q9NV29 134 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 AURKCQ9UQB9 309 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 F5H5P2 479 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 P2RY10O00398 339 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 GNGT2O14610 69 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 RER1O15258 196 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 ENSAO43768 121 aaKnown RBP10.82□□□□□ -0.68
HDAC6-227ENST00000485102 RRP9O43818 475 aaKnown RBP10.82□□□□□ -0.68
HDAC6-227ENST00000485102 SLC16A7O60669 478 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 CLPXO76031 633 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 GADD45GO95257 159 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 PTBP3O95758 552 aaKnown RBP10.82□□□□□ -0.68
HDAC6-227ENST00000485102 MELTFP08582 738 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 DBHP09172 617 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 MMP9P14780 707 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 SDHAP31040 664 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 MSX2P35548 267 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-227ENST00000485102 RAD23AP54725 363 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 ACTR3P61158 418 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 MS4A2Q01362 244 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 SRSF4Q08170 494 aaKnown RBP10.82□□□□□ -0.68
HDAC6-227ENST00000485102 MAB21L1Q13394 359 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 CD276Q5ZPR3 534 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 ZNF620Q6ZNG0 422 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 ADCK1Q86TW2 530 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 MOGAT3Q86VF5 341 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 SSMEM1Q8WWF3 244 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 DYRK2Q92630 601 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 STMN2Q93045 179 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 DUS3LQ96G46 650 aaKnown RBP10.82□□□□□ -0.68
HDAC6-227ENST00000485102 C7orf34Q96L11 122 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 CDADC1Q9BWV3 514 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 SYT4Q9H2B2 425 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 REEP1Q9H902 201 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 ARMC1Q9NVT9 282 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 PTTG3PQ9NZH4 202 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 NDUFAF4Q9P032 175 aa10.82□□□□□ -0.68
HDAC6-227ENST00000485102 COA3Q9Y2R0 106 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-227ENST00000485102 TCRBV5S2A0A599 114 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 ZNF879B4DU55 563 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 C22orf46C9J442 243 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 J3KTA2 159 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 FKBP6O75344 327 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 NDUFB2O95178 105 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 TXNDC12O95881 172 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 SEMG1P04279 462 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 IRF2P14316 349 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 ATP6V1B2P21281 511 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 FPR3P25089 353 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 CFHR2P36980 270 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 CD200P41217 278 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 HMGA2P52926 109 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 COX10Q12887 443 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 KRR1Q13601 381 aaKnown RBP10.81□□□□□ -0.68
HDAC6-227ENST00000485102 KCNJ8Q15842 424 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 CLEC12AQ5QGZ9 265 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 FAM201AQ5SY85 155 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 ASPHD2Q6ICH7 369 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 BRICD5Q6PL45 260 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 LYPD2Q6UXB3 125 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 ZNF730Q6ZMV8 503 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 PLPP7Q8NBV4 271 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 PAPD5Q8NDF8 572 aaKnown RBP10.81□□□□□ -0.68
HDAC6-227ENST00000485102 CHID1Q9BWS9 393 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 HCAR1Q9BXC0 346 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 NUAK2Q9H093 628 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 KIF17Q9P2E2 1029 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 RHCGQ9UBD6 479 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 SIGLEC7Q9Y286 467 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 LHFPL6Q9Y693 200 aa10.81□□□□□ -0.68
HDAC6-227ENST00000485102 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 NDUFA2O43678 99 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 CST1P01037 141 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 FASP25445 335 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 CRABP1P29762 137 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 GPR4P46093 362 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 YAP1P46937 504 aaKnown RBP10.8□□□□□ -0.68
HDAC6-227ENST00000485102 SPIBQ01892 262 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 OR2T5Q6IEZ7 315 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 TBPL2Q6SJ96 375 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 OR11L1Q8NGX0 322 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 OR2T29Q8NH02 315 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 TBC1D15Q8TC07 691 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 SLC7A13Q8TCU3 470 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 CANT1Q8WVQ1 401 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 GATAD2BQ8WXI9 593 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 DNAJC9Q8WXX5 260 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 NRBF2Q96F24 287 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 DHRS1Q96LJ7 313 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 TBX15Q96SF7 602 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 RBM4BQ9BQ04 359 aaKnown RBP10.8□□□□□ -0.68
HDAC6-227ENST00000485102 SLC22A4Q9H015 551 aa10.8□□□□□ -0.68
HDAC6-227ENST00000485102 MARCH7Q9H992 704 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms