RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TIGD6Q17RP2 521 aa15.29■□□□□ 0.04
CPNE1-224ENST00000483359 ODF4Q2M2E3 257 aa15.29■□□□□ 0.04
CPNE1-224ENST00000483359 MST1LQ2TV78 715 aa15.29■□□□□ 0.04
CPNE1-224ENST00000483359 OR2G6Q5TZ20 316 aa15.29■□□□□ 0.04
CPNE1-224ENST00000483359 CMBLQ96DG6 245 aa15.29■□□□□ 0.04
CPNE1-224ENST00000483359 TRAF4Q9BUZ4 470 aaPredicted RBP15.29■□□□□ 0.04
CPNE1-224ENST00000483359 ST6GALNAC2Q9UJ37 374 aa15.29■□□□□ 0.04
CPNE1-224ENST00000483359 R4GMQ9 66 aa15.29■□□□□ 0.04
CPNE1-224ENST00000483359 RAF1P04049 648 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 CRHBPP24387 322 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 ALDH3B1P43353 468 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 SNRPD2P62316 118 aaKnown RBP15.28■□□□□ 0.04
CPNE1-224ENST00000483359 CSNK2BP67870 215 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 PSG7Q13046 419 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 MBNL2Q5VZF2 373 aaKnown RBP15.28■□□□□ 0.04
CPNE1-224ENST00000483359 PGAP1Q75T13 922 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 MRPL21Q7Z2W9 205 aaKnown RBP15.28■□□□□ 0.04
CPNE1-224ENST00000483359 DTX2Q86UW9 622 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 OR5AS1Q8N127 324 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 BHLHE23Q8NDY6 225 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 RORBQ92753 470 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 PBOV1Q9GZY1 135 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 OR10A2Q9H208 303 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 FKBP14Q9NWM8 211 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 EXOSC1Q9Y3B2 195 aaKnown RBP15.28■□□□□ 0.04
CPNE1-224ENST00000483359 TPRKBQ9Y3C4 175 aa15.28■□□□□ 0.04
CPNE1-224ENST00000483359 TMEM129A0AVI4 362 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 B9A039 149 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 SRSF10O75494 262 aaKnown RBP15.27■□□□□ 0.04
CPNE1-224ENST00000483359 CCDC159P0C7I6 412 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 DCTDP32321 178 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 SELENOVP59797 346 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 EFNB3Q15768 340 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 NKPD1Q17RQ9 610 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 SWI5Q1ZZU3 235 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 OR2T2Q6IF00 324 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 C11orf71Q6IPW1 123 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 COMMD2Q86X83 199 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 C1orf174Q8IYL3 243 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 ZCCHC24Q8N2G6 241 aaKnown RBP15.27■□□□□ 0.04
CPNE1-224ENST00000483359 OR52H1Q8NGJ2 320 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 PELI1Q96FA3 418 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 MRPL48Q96GC5 212 aaKnown RBP15.27■□□□□ 0.04
CPNE1-224ENST00000483359 REEP6Q96HR9 211 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 SIGLEC11Q96RL6 698 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 JAM3Q9BX67 310 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 CACNG6Q9BXT2 260 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 DYNLRB1Q9NP97 96 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 CHCHD3Q9NX63 227 aaKnown RBP15.27■□□□□ 0.04
CPNE1-224ENST00000483359 TAAR3PQ9P1P4 343 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 ERVK-18Q9QC07 812 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 SLC22A13Q9Y226 551 aa15.27■□□□□ 0.04
CPNE1-224ENST00000483359 IGLV3-9A0A075B6K5 115 aa15.27■□□□□ 0.03
CPNE1-224ENST00000483359 H3BSH0 61 aa15.27■□□□□ 0.03
CPNE1-224ENST00000483359 TIMM8AO60220 97 aaPredicted RBP15.27■□□□□ 0.03
CPNE1-224ENST00000483359 TACSTD2P09758 323 aa15.27■□□□□ 0.03
CPNE1-224ENST00000483359 CD53P19397 219 aa15.27■□□□□ 0.03
CPNE1-224ENST00000483359 MMP16P51512 607 aa15.27■□□□□ 0.03
CPNE1-224ENST00000483359 SLC35A2P78381 396 aa15.27■□□□□ 0.03
CPNE1-224ENST00000483359 BCL2L15Q5TBC7 163 aa15.27■□□□□ 0.03
CPNE1-224ENST00000483359 SPRYD4Q8WW59 207 aaPredicted RBP15.27■□□□□ 0.03
CPNE1-224ENST00000483359 GTF3AQ92664 365 aaKnown RBP15.27■□□□□ 0.03
CPNE1-224ENST00000483359 CCDC90BQ9GZT6 254 aa15.27■□□□□ 0.03
CPNE1-224ENST00000483359 SP140LQ9H930 580 aa15.27■□□□□ 0.03
CPNE1-224ENST00000483359 OR52A1Q9UKL2 312 aa15.27■□□□□ 0.03
CPNE1-224ENST00000483359 ANKRD17O75179 2603 aaKnown RBP15.27■□□□□ 0.03
CPNE1-224ENST00000483359 XRCC2O43543 280 aa15.26■□□□□ 0.03
CPNE1-224ENST00000483359 CDK1P06493 297 aa15.26■□□□□ 0.03
CPNE1-224ENST00000483359 NAT2P11245 290 aa15.26■□□□□ 0.03
CPNE1-224ENST00000483359 EEF1B2P24534 225 aaKnown RBP15.26■□□□□ 0.03
CPNE1-224ENST00000483359 FBXW12Q6X9E4 464 aa15.26■□□□□ 0.03
CPNE1-224ENST00000483359 KLHL36Q8N4N3 616 aa15.26■□□□□ 0.03
CPNE1-224ENST00000483359 MYDGFQ969H8 173 aa15.26■□□□□ 0.03
CPNE1-224ENST00000483359 SGK3Q96BR1 496 aa15.26■□□□□ 0.03
CPNE1-224ENST00000483359 SOX7Q9BT81 388 aa15.26■□□□□ 0.03
CPNE1-224ENST00000483359 TPK1Q9H3S4 243 aa15.26■□□□□ 0.03
CPNE1-224ENST00000483359 G6PC2Q9NQR9 355 aa15.26■□□□□ 0.03
CPNE1-224ENST00000483359 SNX5Q9Y5X3 404 aa15.26■□□□□ 0.03
CPNE1-224ENST00000483359 M0R233 179 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 MYL12BO14950 172 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 IGHV3-13P01766 116 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 WDR38Q5JTN6 314 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 RBM48Q5RL73 367 aaKnown RBP15.25■□□□□ 0.03
CPNE1-224ENST00000483359 CDH24Q86UP0 819 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 SYS1Q8N2H4 156 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 VRK1Q99986 396 aaPredicted RBP15.25■□□□□ 0.03
CPNE1-224ENST00000483359 MOB1AQ9H8S9 216 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 NUFIP1Q9UHK0 495 aaKnown RBP15.25■□□□□ 0.03
CPNE1-224ENST00000483359 PURGQ9UJV8 347 aaKnown RBP15.25■□□□□ 0.03
CPNE1-224ENST00000483359 E9PI62 339 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 LILRA1O75019 489 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 TTRP02766 147 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 MT-ND5P03915 603 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 RAC2P15153 192 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 TUBG1P23258 451 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 NANOS3P60323 173 aaKnown RBP15.25■□□□□ 0.03
CPNE1-224ENST00000483359 TMPRSS11AQ6ZMR5 421 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 KCTD20Q7Z5Y7 419 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 CATSPERDQ86XM0 798 aa15.25■□□□□ 0.03
CPNE1-224ENST00000483359 PRSS35Q8N3Z0 413 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms