RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 H3F3CQ6NXT2 135 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 SLAMF6Q96DU3 332 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 ZNF845Q96IR2 970 aaPredicted RBP12.78□□□□□ -0.36
CHD3-211ENST00000481999 GINS4Q9BRT9 223 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 TMPRSS13Q9BYE2 586 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 G6PC2Q9NQR9 355 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 CYB5R1Q9UHQ9 305 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 DHDHQ9UQ10 334 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 POLR1DQ9Y2S0 133 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 BSNQ9UPA5 3926 aa12.77□□□□□ -0.36
CHD3-211ENST00000481999 CACNA1GO43497 2377 aa12.77□□□□□ -0.36
CHD3-211ENST00000481999 TRAV18A0A075B6X5 111 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 PLSCR5A0PG75 271 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 P2RY10O00398 339 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 LRP3O75074 770 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 GDF1P27539 372 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 LAP3P28838 519 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 PRKXP51817 358 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 SLC35A1P78382 337 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 SSBP1Q04837 148 aaKnown RBP12.77□□□□□ -0.37
CHD3-211ENST00000481999 OPCMLQ14982 345 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 TMEM81Q6P7N7 255 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 CATSPERDQ86XM0 798 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 LRRC18Q8N456 261 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 ZNF454Q8N9F8 522 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 OR6N1Q8NGY5 312 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 SUN5Q8TC36 379 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 ASB5Q8WWX0 329 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 CDC6Q99741 560 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 CKLFQ9UBR5 152 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 CIB4A0PJX0 185 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 SMAD9O15198 467 aaKnown RBP12.77□□□□□ -0.37
CHD3-211ENST00000481999 CD2P06729 351 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 FCER2P06734 321 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 CD63P08962 238 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 PRSS3P35030 304 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 FOXO1Q12778 655 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 PCK2Q16822 640 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 C2orf76Q3KRA6 126 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 DNM1P34Q6PK57 102 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 GGNQ86UU5 652 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 VASH2Q86V25 355 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 ADAMTS17Q8TE56 1095 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 ELMOD3Q96FG2 381 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 TMEM41AQ96HV5 264 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 GSX2Q9BZM3 304 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 TAS2R4Q9NYW5 299 aa12.77□□□□□ -0.37
CHD3-211ENST00000481999 GDF2Q9UK05 429 aaPredicted RBP12.77□□□□□ -0.37
CHD3-211ENST00000481999 MAP1BP46821 2468 aaKnown RBP12.76□□□□□ -0.37
CHD3-211ENST00000481999 TUBAL3A6NHL2 446 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 NPIPB13A6NJU9 1138 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 ZNF726A6NNF4 738 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 FAM166BA8MTA8 275 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 NPIPB4C9JG80 1138 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 GFRA3O60609 400 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 CFDP00746 253 aaPredicted RBP12.76□□□□□ -0.37
CHD3-211ENST00000481999 PDGFAP04085 211 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 H2BFMP0C1H6 154 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 AKAIN1P0CW23 69 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 THEM4Q5T1C6 240 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 GLT8D1Q68CQ7 371 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 SIGIRRQ6IA17 410 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 FAM166AQ6J272 317 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 SLC36A1Q7Z2H8 476 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 BIVMQ86UB2 503 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 OR10H5Q8NGA6 315 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 OR6X1Q8NH79 312 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 NKD1Q969G9 470 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 ZNF319Q9P2F9 582 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 LOC107986453A0A1B0GWG9 222 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 E9PLN8 166 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 STMND1H3BQB6 276 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 L7N2F9 121 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 CXCL13O43927 109 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 PMS2P2O95744 297 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 RLN1P04808 185 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 VSIG10L2P0DP72 767 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 GTF2F2P13984 249 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 NFYAP23511 347 aaPredicted RBP12.76□□□□□ -0.37
CHD3-211ENST00000481999 SRYQ05066 204 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 RFPL4BQ6ZWI9 263 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 RNF144BQ7Z419 303 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 NAA40Q86UY6 237 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 COMMD7Q86VX2 200 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 ZIC4Q8N9L1 334 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 RNF133Q8WVZ7 376 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 SFXN2Q96NB2 322 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 PIGQQ9BRB3 760 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 CGGBP1Q9UFW8 167 aaPredicted RBP12.76□□□□□ -0.37
CHD3-211ENST00000481999 OR52A1Q9UKL2 312 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 R4GMQ9 66 aa12.76□□□□□ -0.37
CHD3-211ENST00000481999 A0A087WZY1 265 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 KDM4BO94953 1096 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 ACTBP60709 375 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 RAC1P63000 192 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 ACTG1P63261 375 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 GABREP78334 506 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 SGCAQ16586 387 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 GFOD2Q3B7J2 385 aa12.75□□□□□ -0.37
CHD3-211ENST00000481999 SLC25A47Q6Q0C1 308 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms