RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 TSPAN31Q12999 210 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 SLC9A3R2Q15599 337 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 MPPED2Q15777 294 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 ZNF181Q2M3W8 571 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 TUSC1Q2TAM9 212 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 SNAI3Q3KNW1 292 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 SAMD4BQ5PRF9 694 aaKnown RBP5.57□□□□□ -1.52
FN1-220ENST00000480024 WDR25Q64LD2 544 aaPredicted RBP5.57□□□□□ -1.52
FN1-220ENST00000480024 RUSC1-AS1Q66K80 236 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 SHISA2Q6UWI4 295 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 DCDC5Q6ZRR9 648 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 C9orf139Q6ZV77 190 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 SPATC1Q76KD6 591 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 ZDHHC21Q8IVQ6 265 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 PGAM4Q8N0Y7 254 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 OR51L1Q8NGJ5 315 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 OR9Q1Q8NGQ5 310 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 Q8TCH9 128 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 GNPDA2Q8TDQ7 276 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 RAB40AQ8WXH6 277 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 SPTSSAQ969W0 71 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 DACT3Q96B18 629 aaPredicted RBP5.57□□□□□ -1.52
FN1-220ENST00000480024 MAP6Q96JE9 813 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 PCGF1Q9BSM1 259 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 COPS4Q9BT78 406 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 UNKLQ9H9P5 680 aaKnown RBP5.57□□□□□ -1.52
FN1-220ENST00000480024 FN3KRPQ9HA64 309 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 TNFRSF19Q9NS68 423 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 TBC1D23Q9NUY8 699 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 CTSZQ9UBR2 303 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 COMMD3-BMI1R4GMX3 469 aa5.57□□□□□ -1.52
FN1-220ENST00000480024 VWFP04275 2813 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 TRRAPQ9Y4A5 3859 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 KIR2DS1A0A191URI9 304 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 A0A1B0GWJ7 208 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 hCG_1807616A0A1W2PRN6 198 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 GGT3PA6NGU5 568 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 A6NLC8 198 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 CD300LBA8K4G0 201 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 TNFRSF11BO00300 401 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 BHLHE40O14503 412 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 HOXA3O43365 443 aaPredicted RBP5.56□□□□□ -1.52
FN1-220ENST00000480024 ENSAO43768 121 aaKnown RBP5.56□□□□□ -1.52
FN1-220ENST00000480024 IDH3BO43837 385 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 SNX3O60493 162 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 GYPBP06028 91 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 SFTPBP07988 381 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 PPIAL4GP0DN37 164 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 SLC2A1P11166 492 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 ATP6V1B2P21281 511 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 MDKP21741 143 aaPredicted RBP5.56□□□□□ -1.52
FN1-220ENST00000480024 CPT2P23786 658 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 PRKXP51817 358 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 IL13RA1P78552 427 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 MXRA7P84157 204 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 OR8B8Q15620 311 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 DEFB112Q30KQ8 113 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 PRR31Q5SQ13 230 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 GLYATL3Q5SZD4 288 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 GPR157Q5UAW9 335 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 SFRP4Q6FHJ7 346 aaPredicted RBP5.56□□□□□ -1.52
FN1-220ENST00000480024 RPL13AP3Q6NVV1 102 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 CYP2R1Q6VVX0 501 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 DCXRQ7Z4W1 244 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 CPLX4Q7Z7G2 160 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 DEFB107AQ8IZN7 70 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 FITM2Q8N6M3 262 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 CELF2-AS1Q8N7Q2 184 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 SLC37A3Q8NCC5 494 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 OR56B2PQ8NGI1 322 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 OR8D4Q8NGM9 314 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 OR2T4Q8NH00 348 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 ZNRF4Q8WWF5 429 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 ZDHHC16Q969W1 377 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 SLAMF6Q96DU3 332 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 CDRT15Q96T59 188 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 BTBD10Q9BSF8 475 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 MARCH7Q9H992 704 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 SMURF1Q9HCE7 757 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 IL1RAPQ9NPH3 570 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 ARL8BQ9NVJ2 186 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 C1orf123Q9NWV4 160 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 RNF7Q9UBF6 113 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 CD300AQ9UGN4 299 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 TAGLN3Q9UI15 199 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 KCNG2Q9UJ96 466 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 NOP16Q9Y3C1 178 aaKnown RBP5.56□□□□□ -1.52
FN1-220ENST00000480024 N6AMT1Q9Y5N5 214 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 LYVE1Q9Y5Y7 322 aa5.56□□□□□ -1.52
FN1-220ENST00000480024 CLDN34H7C241 214 aa5.55□□□□□ -1.52
FN1-220ENST00000480024 LGALS8O00214 317 aa5.55□□□□□ -1.52
FN1-220ENST00000480024 TBX1O43435 398 aa5.55□□□□□ -1.52
FN1-220ENST00000480024 KCNAB3O43448 404 aa5.55□□□□□ -1.52
FN1-220ENST00000480024 ADAM20O43506 726 aa5.55□□□□□ -1.52
FN1-220ENST00000480024 GMDSO60547 372 aa5.55□□□□□ -1.52
FN1-220ENST00000480024 CCNB2O95067 398 aa5.55□□□□□ -1.52
FN1-220ENST00000480024 SOX14O95416 240 aa5.55□□□□□ -1.52
FN1-220ENST00000480024 FSTL3O95633 263 aa5.55□□□□□ -1.52
FN1-220ENST00000480024 GYPAP02724 150 aa5.55□□□□□ -1.52
FN1-220ENST00000480024 GRPP07492 148 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms