RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 A0A096LNT2 108 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 SAGE2PA6NJ88 616 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 IQCF5A8MTL0 148 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 E5RI56 91 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 E7EQ34 232 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 SRPX2O60687 465 aaPredicted RBP4.04□□□□□ -1.76
UPF3A-205ENST00000479712 TPST2O60704 377 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 NIPSNAP2O75323 286 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 C8GP07360 202 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 LAMP1P11279 417 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 FOLR2P14207 255 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 PGCP20142 388 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 PTBP1P26599 531 aaKnown RBP eCLIP4.04□□□□□ -1.76
UPF3A-205ENST00000479712 SHC1P29353 583 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 CASQ1P31415 396 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 SLC1A2P43004 574 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 AP1S2P56377 157 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
UPF3A-205ENST00000479712 RND3P61587 244 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 CKAP4Q07065 602 aaKnown RBP4.04□□□□□ -1.76
UPF3A-205ENST00000479712 SYPL1Q16563 259 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 ZNF57Q68EA5 555 aaPredicted RBP4.04□□□□□ -1.76
UPF3A-205ENST00000479712 DUPD1Q68J44 220 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 FAM45BPQ6NSW5 357 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 KRT222Q8N1A0 295 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 LINC01555Q8NAE3 123 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 SYT14Q8NB59 555 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 SPATA4Q8NEY3 305 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 STXBP6Q8NFX7 210 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 OR2T33Q8NG76 320 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 OR9A1PQ8NGU1 263 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 FAM45AQ8TCE6 357 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 CD200R1Q8TD46 325 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 NAT14Q8WUY8 206 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 IL1F10Q8WWZ1 152 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 PIK3IP1Q96FE7 263 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 TMEM80Q96HE8 168 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 CCT8L2Q96SF2 557 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 MYCBPQ99417 103 aaPredicted RBP4.04□□□□□ -1.76
UPF3A-205ENST00000479712 SLC7A5P2Q9GIP4 190 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 PCBD2Q9H0N5 130 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 OPN3Q9H1Y3 402 aaPredicted RBP4.04□□□□□ -1.76
UPF3A-205ENST00000479712 XKR8Q9H6D3 395 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 POPDC3Q9HBV1 291 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 CLEC5AQ9NY25 188 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 TAS2R13Q9NYV9 303 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 PDP1Q9P0J1 537 aaPredicted RBP4.04□□□□□ -1.76
UPF3A-205ENST00000479712 CPAMD8Q8IZJ3 1885 aa4.04□□□□□ -1.76
UPF3A-205ENST00000479712 A0A1B0GU03 582 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 A0A1W2PPV9 198 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 GOLGA8KD6RF30 607 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 GOLGA8TH3BQL2 631 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 GOLGA8MH3BSY2 632 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 SLC17A2O00624 439 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 TXNDC9O14530 226 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 OR2B3O76000 313 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 SLC2A10O95528 541 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 MAGP20916 626 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 CMPK1P30085 196 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 PEBP1P30086 187 aaKnown RBP4.03□□□□□ -1.76
UPF3A-205ENST00000479712 HPCAL1P37235 193 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 EFNA3P52797 238 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 PRDX1Q06830 199 aaKnown RBP4.03□□□□□ -1.76
UPF3A-205ENST00000479712 COX10Q12887 443 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 ZNF154Q13106 437 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 NAB1Q13506 487 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 WHAMMP3Q1A5X7 153 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 KLHL38Q2WGJ6 581 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 MAJINQ3KP22 176 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 ACSBG2Q5FVE4 666 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 CDKL4Q5MAI5 379 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 PVRIGQ6DKI7 326 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 KCNIP4Q6PIL6 250 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 CYHR1Q6ZMK1 362 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 SHISA6Q6ZSJ9 500 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 LINC01561Q8N1V8 128 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 ZNF485Q8NCK3 441 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 OR2L3Q8NG85 312 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 OR2A1Q8NGT9 310 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 OR2Y1Q8NGV0 311 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 MCOLN3Q8TDD5 553 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 ADAMTS16Q8TE57 1224 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 TRUB1Q8WWH5 349 aaKnown RBP4.03□□□□□ -1.76
UPF3A-205ENST00000479712 PSMF1Q92530 271 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 N4BP2L2Q92802 583 aaPredicted RBP4.03□□□□□ -1.76
UPF3A-205ENST00000479712 CAPZA3Q96KX2 299 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 GPR21Q99679 349 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 SLC6A7Q99884 636 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 VCX2Q9H322 139 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 WDR54Q9H977 334 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 PARVBQ9HBI1 364 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 ZNF160Q9HCG1 818 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 FBXO6Q9NRD1 293 aaPredicted RBP4.03□□□□□ -1.76
UPF3A-205ENST00000479712 EURLQ9NYK6 297 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 NXT1Q9UKK6 140 aaKnown RBP4.03□□□□□ -1.76
UPF3A-205ENST00000479712 UTP11Q9Y3A2 253 aaKnown RBP4.03□□□□□ -1.76
UPF3A-205ENST00000479712 OARD1Q9Y530 152 aa4.03□□□□□ -1.76
UPF3A-205ENST00000479712 ANKRD12Q6UB98 2062 aa4.02□□□□□ -1.77
UPF3A-205ENST00000479712 PRR14LQ5THK1 2151 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms