RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 DDX28Q9NUL7 540 aaKnown RBP13.2□□□□□ -0.3
CLDN11-204ENST00000477531 PPIAL4AQ9Y536 164 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 INSIG2Q9Y5U4 225 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 CD300LBA8K4G0 201 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 TRAPPC2LH3BP13 241 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 ZNF593O00488 134 aaPredicted RBP13.19□□□□□ -0.3
CLDN11-204ENST00000477531 SOX14O95416 240 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 FSTL3O95633 263 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 WNT2P09544 360 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 RBMXP38159 391 aaKnown RBP13.19□□□□□ -0.3
CLDN11-204ENST00000477531 RPS27P42677 84 aaKnown RBP13.19□□□□□ -0.3
CLDN11-204ENST00000477531 GATA4P43694 442 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 SLC15A1P46059 708 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 PRSS12P56730 875 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 SEC61A1P61619 476 aaKnown RBP13.19□□□□□ -0.3
CLDN11-204ENST00000477531 GNB2P62879 340 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 CRMP1Q14194 572 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 KLBQ86Z14 1044 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 DEFB108BQ8NET1 73 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 OR10G2Q8NGC3 310 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 CCDC124Q96CT7 223 aaKnown RBP13.19□□□□□ -0.3
CLDN11-204ENST00000477531 ASB9Q96DX5 294 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 NEIL1Q96FI4 390 aaPredicted RBP13.19□□□□□ -0.3
CLDN11-204ENST00000477531 ARMC1Q9NVT9 282 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 NUP50Q9UKX7 468 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 N6AMT1Q9Y5N5 214 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 COMMD3-BMI1R4GMX3 469 aa13.19□□□□□ -0.3
CLDN11-204ENST00000477531 A0A1B0GWJ7 208 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 ZNF878C9JN71 531 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 H3BN98 237 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 GNGT2O14610 69 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 CST1P01037 141 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 GYPBP06028 91 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 SPI1P17947 270 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 CA6P23280 308 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 CD200P41217 278 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 PRKXP51817 358 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 MS4A2Q01362 244 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 MZT1Q08AG7 82 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 KCNJ8Q15842 424 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 TEX30Q5JUR7 227 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 ZNF362Q5T0B9 420 aaPredicted RBP13.18□□□□□ -0.3
CLDN11-204ENST00000477531 LRRN1Q6UXK5 716 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 SPERTQ8NA61 448 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 ZNF511Q8NB15 262 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 OR4Q3Q8NH05 313 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 GIPC3Q8TF64 312 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 C22orf15Q8WYQ4 148 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 OTULINQ96BN8 352 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 SLAMF6Q96DU3 332 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 KCNJ15Q99712 375 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 TMEM246Q9BRR3 403 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 C1orf21Q9H246 121 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 OPA3Q9H6K4 179 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 SP140LQ9H930 580 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 FN3KRPQ9HA64 309 aa13.18□□□□□ -0.3
CLDN11-204ENST00000477531 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.17□□□□□ -0.3
CLDN11-204ENST00000477531 GMDSO60547 372 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 FSHBP01225 129 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 APOC1P02654 83 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 HOXB6P17509 224 aaKnown RBP13.17□□□□□ -0.3
CLDN11-204ENST00000477531 PAICSP22234 425 aaKnown RBP13.17□□□□□ -0.3
CLDN11-204ENST00000477531 GRB2P62993 217 aaKnown RBP13.17□□□□□ -0.3
CLDN11-204ENST00000477531 ZNF92Q03936 586 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 MAB21L1Q13394 359 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 SNAI3Q3KNW1 292 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 ZNF404Q494X3 552 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 LYPD4Q6UWN0 246 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 CD300LDQ6UXZ3 194 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 OR10S1Q8NGN2 331 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 OR2AE1Q8NHA4 323 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 Q8TCH9 128 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 ZNRF4Q8WWF5 429 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 THTPAQ9BU02 230 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 ADAT1Q9BUB4 502 aaKnown RBP13.17□□□□□ -0.3
CLDN11-204ENST00000477531 CHID1Q9BWS9 393 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 TOR3AQ9H497 397 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 CMC2Q9NRP2 79 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 UFSP2Q9NUQ7 469 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 VNN3Q9NY84 501 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 MRPL15Q9P015 296 aaKnown RBP13.17□□□□□ -0.3
CLDN11-204ENST00000477531 RNF7Q9UBF6 113 aa13.17□□□□□ -0.3
CLDN11-204ENST00000477531 XRCC2O43543 280 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 FAM20BO75063 409 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 ANXA2P07355 339 aaKnown RBP13.16□□□□□ -0.3
CLDN11-204ENST00000477531 HSD11B1P28845 292 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 OTX1P32242 354 aaPredicted RBP13.16□□□□□ -0.3
CLDN11-204ENST00000477531 GRK5P34947 590 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 DDOSTP39656 456 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 PMELP40967 661 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 PITPNBP48739 271 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 EIF2B1Q14232 305 aaKnown RBP13.16□□□□□ -0.3
CLDN11-204ENST00000477531 PCK2Q16822 640 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 FAM201AQ5SY85 155 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 GLYATL3Q5SZD4 288 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 PRAMEF6Q5VXH4 476 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 DCDC5Q6ZRR9 648 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 SHFQ7M4L6 423 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 PLPP7Q8NBV4 271 aa13.16□□□□□ -0.3
CLDN11-204ENST00000477531 RAB40AQ8WXH6 277 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms