RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ADAD2Q8NCV1 583 aaKnown RBP7.5□□□□□ -1.21
VAPB-205ENST00000476395 OR10D4PQ8NGN7 298 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 OR13C8Q8NGS7 320 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 MRGPRFQ96AM1 343 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 CCNL2Q96S94 520 aaPredicted RBP7.5□□□□□ -1.21
VAPB-205ENST00000476395 WDR76Q9H967 626 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 MMP26Q9NRE1 261 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 MMP24Q9Y5R2 645 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 HEBP2Q9Y5Z4 205 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 C7orf77A4D0Y5 90 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 FITM1A5D6W6 292 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ADAM10O14672 748 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 CBR3O75828 277 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 GLCEO94923 617 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 SLC35E2P0CK97 266 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 AKAIN1P0CW23 69 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 CD37P11049 281 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 STARD6P59095 220 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ZNF345Q14585 488 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 NFATC4Q14934 902 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 ATG4DQ86TL0 474 aaPredicted RBP7.5□□□□□ -1.21
VAPB-205ENST00000476395 LYPD6Q86Y78 171 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 BAP18Q8IXM2 172 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 INO80EQ8NBZ0 244 aaPredicted RBP7.5□□□□□ -1.21
VAPB-205ENST00000476395 OR9A4Q8NGU2 314 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 PPP1R14AQ96A00 147 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 CCDC74AQ96AQ1 378 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 SLC6A7Q99884 636 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 SULT4A1Q9BR01 284 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 RAB33BQ9H082 229 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 SLC26A1Q9H2B4 701 aa7.5□□□□□ -1.21
VAPB-205ENST00000476395 PHF3Q92576 2039 aaKnown RBP7.49□□□□□ -1.21
VAPB-205ENST00000476395 TMEM72A0PK05 275 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 BLACEA4D250 179 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 B4E171 279 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 FAM157AC9JC47 383 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ITGA10O75578 1167 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ITGA5P08648 1049 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 BTG2P78543 158 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 FOXO1Q12778 655 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 NNATQ16517 81 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 MOGAT2Q3SYC2 334 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ACTBL2Q562R1 376 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 SLC35D3Q5M8T2 416 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ZNF776Q68DI1 518 aaPredicted RBP7.49□□□□□ -1.21
VAPB-205ENST00000476395 SPNS3Q6ZMD2 512 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 BCORP1Q8N888 145 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 C15orf54Q8N8G6 183 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ZBTB8AQ96BR9 441 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 TSPAN32Q96QS1 320 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 UCN2Q96RP3 112 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ZNF587Q96SQ5 575 aaPredicted RBP7.49□□□□□ -1.21
VAPB-205ENST00000476395 ALG12Q9BV10 488 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 TMPRSS5Q9H3S3 457 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 TCF7L1Q9HCS4 588 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 TMEM100Q9NV29 134 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 HIF3AQ9Y2N7 669 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ADAMTS20P59510 1910 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 EXPH5Q8NEV8 1989 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 TBC1D3DA0A087WVF3 549 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 TBC1D3IA0A087WXS9 549 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 TBC1D3LB9A6J9 549 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 H7C1C5 153 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 J3QW42 95 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ATXN7O15265 892 aaPredicted RBP7.49□□□□□ -1.21
VAPB-205ENST00000476395 XRCC3O43542 346 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 GPRIN2O60269 458 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 DIRAS3O95661 229 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 AK1P00568 194 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 IFNA2P01563 188 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 TBC1D3HP0C7X1 549 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 CALCBP10092 127 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 CCR4P51679 360 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 NDUFA6P56556 154 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 LCN6P62502 163 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ZNF74Q16587 644 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ARHGAP40Q5TG30 622 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 TBC1D3CQ6IPX1 549 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 FOXRED2Q8IWF2 684 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 SLC35F3Q8IY50 421 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 TBC1D3Q8IZP1 549 aaPredicted RBP7.49□□□□□ -1.21
VAPB-205ENST00000476395 PHYHIPLQ96FC7 376 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 OR5AC2Q9NZP5 309 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 FER1L5A0AVI2 2057 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 FRYLO94915 3013 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 A0A1W2PPC1 479 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 C5orf51A6NDU8 294 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 BTBD17A6NE02 478 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 EPOPA6NHQ4 379 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 SHISA7A6NL88 538 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 METTL12A8MUP2 240 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 MED6O75586 246 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 OPN1LWP04000 364 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 FAUP35544 74 aaKnown RBP7.49□□□□□ -1.21
VAPB-205ENST00000476395 RAB38P57729 211 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 LSM6P62312 80 aaKnown RBP7.49□□□□□ -1.21
VAPB-205ENST00000476395 GAS6Q14393 721 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 DEFB110Q30KQ9 67 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ZNF585AQ6P3V2 769 aa7.49□□□□□ -1.21
VAPB-205ENST00000476395 ZNF627Q7L945 461 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms