RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 S100PBPQ96BU1 408 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 RRNAD1Q96FB5 475 aaKnown RBP11.62□□□□□ -0.55
CCNL1-216ENST00000475298 GPX7Q96SL4 187 aaPredicted RBP11.62□□□□□ -0.55
CCNL1-216ENST00000475298 MICU1Q9BPX6 476 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 SULT4A1Q9BR01 284 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 LMAN1LQ9HAT1 526 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 CUTCQ9NTM9 273 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 PARPBPQ9NWS1 579 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 HIF3AQ9Y2N7 669 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 NOP16Q9Y3C1 178 aaKnown RBP11.62□□□□□ -0.55
CCNL1-216ENST00000475298 A0A087X0M5 115 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 A0A1B0GX30 115 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 A0A1W2PR77 199 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 BLACEA4D250 179 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 LILRA5A6NI73 299 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 TMEM150CB9EJG8 249 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 FBXO24O75426 580 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 ASAH2BP0C7U1 165 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 PAX1P15863 534 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 LPAR6P43657 344 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 LSM6P62312 80 aaKnown RBP11.62□□□□□ -0.55
CCNL1-216ENST00000475298 ZP2Q05996 745 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 GAMTQ14353 236 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 MESTQ5EB52 335 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 C1QL4Q86Z23 238 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 GABRG1Q8N1C3 465 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 OR4K17Q8NGC6 315 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 RPS4Y2Q8TD47 263 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 TAAR8Q969N4 342 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 KIRREL1Q96J84 757 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 FOXN4Q96NZ1 517 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 TSPAN32Q96QS1 320 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 MTCH2Q9Y6C9 303 aa11.62□□□□□ -0.55
CCNL1-216ENST00000475298 H0YIG0 161 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 AGPAT2O15120 278 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 PNMTP11086 282 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 IGFBP4P22692 258 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 PPICP45877 212 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 SOX2P48431 317 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 OR1D5P58170 312 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 ZNF117Q03924 483 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 SURF2Q15527 256 aaPredicted RBP11.61□□□□□ -0.55
CCNL1-216ENST00000475298 ODF4Q2M2E3 257 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 ZNF684Q5T5D7 378 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 ZNF574Q6ZN55 896 aaPredicted RBP11.61□□□□□ -0.55
CCNL1-216ENST00000475298 ZNF440Q8IYI8 595 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 EXD3Q8N9H8 876 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 ZBTB8AQ96BR9 441 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 SAT2Q96F10 170 aaPredicted RBP11.61□□□□□ -0.55
CCNL1-216ENST00000475298 FN3KRPQ9HA64 309 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 GAR1Q9NY12 217 aaKnown RBP11.61□□□□□ -0.55
CCNL1-216ENST00000475298 UPB1Q9UBR1 384 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 MRM2Q9UI43 246 aaKnown RBP11.61□□□□□ -0.55
CCNL1-216ENST00000475298 ZNF281Q9Y2X9 895 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 HCRTR2O43614 444 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 GPRIN2O60269 458 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 CTAG2O75638 210 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 DDAH2O95865 285 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 IFNA10P01566 189 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 HLA-AP01891 365 aaKnown RBP11.61□□□□□ -0.55
CCNL1-216ENST00000475298 ARG1P05089 322 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 LIPCP11150 499 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 CD27P26842 260 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 RAB4BP61018 213 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 ANKRD16Q6P6B7 361 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 MARCH3Q86UD3 253 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 GALNT16Q8N428 558 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 ADAMTS17Q8TE56 1095 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 ZNF721Q8TF20 911 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 SECTM1Q8WVN6 248 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 ADAD1Q96M93 576 aaKnown RBP11.61□□□□□ -0.55
CCNL1-216ENST00000475298 NUDT9Q9BW91 350 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 WDR76Q9H967 626 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 TP53TG5Q9Y2B4 290 aa11.61□□□□□ -0.55
CCNL1-216ENST00000475298 FITM1A5D6W6 292 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 C11orf98E9PRG8 122 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 M0QYG6 137 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 WNT11O96014 354 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 ZNF735P0CB33 412 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 S100A2P29034 98 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 PKIAP61925 76 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 ISXQ2M1V0 245 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 LBHQ53QV2 105 aaPredicted RBP11.6□□□□□ -0.55
CCNL1-216ENST00000475298 C1orf189Q5VU69 101 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 BTNL8Q6UX41 500 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 MAMDC2Q7Z304 686 aaPredicted RBP11.6□□□□□ -0.55
CCNL1-216ENST00000475298 ADIPOR1Q96A54 375 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 SLC25A21Q9BQT8 299 aaPredicted RBP11.6□□□□□ -0.55
CCNL1-216ENST00000475298 RNF126Q9BV68 326 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 MRPL37Q9BZE1 423 aaKnown RBP11.6□□□□□ -0.55
CCNL1-216ENST00000475298 PRO1933Q9H354 126 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 GRHPRQ9UBQ7 328 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 ARID1BQ8NFD5 2236 aaPredicted RBP11.6□□□□□ -0.55
CCNL1-216ENST00000475298 CABIN1Q9Y6J0 2220 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 TRAV18A0A075B6X5 111 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 TRBV6-7A0A0A0MS04 114 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 H3BMH7 237 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 UPK3AO75631 287 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 NUDT14O95848 222 aa11.6□□□□□ -0.55
CCNL1-216ENST00000475298 PLGP00747 810 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms