RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SEH1LQ96EE3 360 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 LYZL4Q96KX0 146 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 C1orf147Q96MC9 270 aaPredicted RBP8.63□□□□□ -1.03
USP39-214ENST00000474572 SIGLEC12Q96PQ1 595 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 NKX3-1Q99801 234 aaPredicted RBP8.63□□□□□ -1.03
USP39-214ENST00000474572 GPR84Q9NQS5 396 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 NPDC1Q9NQX5 325 aaPredicted RBP8.63□□□□□ -1.03
USP39-214ENST00000474572 TMEM38BQ9NVV0 291 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 ABI3Q9P2A4 366 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 NCOA6Q14686 2063 aaPredicted RBP8.62□□□□□ -1.03
USP39-214ENST00000474572 OR5H15A6NDH6 313 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 SNRPGP15A8MWD9 76 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 E9PLN8 166 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 TNFSF15O95150 251 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 CD74P04233 296 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 VSIG8P0DPA2 414 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 ANXA3P12429 323 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 CPN1P15169 458 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 ABOP16442 354 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 ZNF20P17024 532 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 POU3F2P20265 443 aaPredicted RBP8.62□□□□□ -1.03
USP39-214ENST00000474572 CD82P27701 267 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 THBS4P35443 961 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 ALDH3B1P43353 468 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 LHX2P50458 406 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 SOX8P57073 446 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 RAB35Q15286 201 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 SF3B4Q15427 424 aaKnown RBP eCLIP8.62□□□□□ -1.03
USP39-214ENST00000474572 RBMS2Q15434 407 aaKnown RBP8.62□□□□□ -1.03
USP39-214ENST00000474572 CSRP2Q16527 193 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 PCGF3Q3KNV8 242 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 MOGAT2Q3SYC2 334 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 NRN1LQ496H8 165 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 PDSS1Q5T2R2 415 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 SPINK14Q6IE38 97 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 CRIP3Q6Q6R5 217 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 GLDNQ6ZMI3 551 aaPredicted RBP8.62□□□□□ -1.03
USP39-214ENST00000474572 FAM57BQ71RH2 274 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 ABHD12BQ7Z5M8 362 aaPredicted RBP8.62□□□□□ -1.03
USP39-214ENST00000474572 LUZP2Q86TE4 346 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 DTX1Q86Y01 620 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 MDS2Q8NDY4 140 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 OR13C9Q8NGT0 318 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 NKD1Q969G9 470 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 FAM46BQ96A09 425 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 PHF21AQ96BD5 680 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 FBXO17Q96EF6 278 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 FER1L6-AS2Q96M78 137 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 SOX7Q9BT81 388 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 LINC00470Q9BZP3 86 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 SLA2Q9H6Q3 261 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 RNF122Q9H9V4 155 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 NOX3Q9HBY0 568 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 ANAPC10Q9UM13 185 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 FLVCR2Q9UPI3 526 aa8.62□□□□□ -1.03
USP39-214ENST00000474572 CACNA1CQ13936 2221 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 IGKV1-9A0A0C4DH69 117 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 C5orf63A6NC05 138 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 METTL21EPA6NDL7 271 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 DHRS7CA6NNS2 312 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 M0R135 149 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 ARPC1BO15143 372 aaKnown RBP8.61□□□□□ -1.03
USP39-214ENST00000474572 SYNGR3O43761 229 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 LRP3O75074 770 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 DHRS3O75911 302 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 HPXP02790 462 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 UBBP0CG47 229 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 SLC2A1P11166 492 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 MPZP25189 248 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 ZNF93P35789 620 aaPredicted RBP8.61□□□□□ -1.03
USP39-214ENST00000474572 GNALP38405 381 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 STARP49675 285 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 VEGFCP49767 419 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 CLDN18P56856 261 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 TAS2R19P59542 299 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 ZP1P60852 638 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 SPEM2Q0P670 501 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 ECH1Q13011 328 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 Q5BKY6 102 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 ZNF626Q68DY1 528 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 FAAP20Q6NZ36 180 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 STEAP1BQ6NZ63 245 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 DRAM2Q6UX65 266 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 UTS2BQ765I0 119 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 AAED1Q7RTV5 226 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 SLC36A1Q7Z2H8 476 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 GABRG1Q8N1C3 465 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 FAM109AQ8N4B1 249 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 ROBO4Q8WZ75 1007 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 SLC39A7Q92504 469 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 ZNF837Q96EG3 531 aaPredicted RBP8.61□□□□□ -1.03
USP39-214ENST00000474572 ZNF799Q96GE5 643 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 MS4A3Q96HJ5 214 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 PGAM5Q96HS1 289 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 FAM71F1Q96KD3 344 aaPredicted RBP8.61□□□□□ -1.03
USP39-214ENST00000474572 HYLS1Q96M11 299 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 RBM24Q9BX46 236 aaKnown RBP8.61□□□□□ -1.03
USP39-214ENST00000474572 LPAR5Q9H1C0 372 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 MYOZ1Q9NP98 299 aaPredicted RBP8.61□□□□□ -1.03
USP39-214ENST00000474572 PLSCR3Q9NRY6 295 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms