RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 TRBV5-7A0A0A0MS05 114 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 TRAV1-2A0A0B4J238 106 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 A0A1B0GTI1 187 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 IQCMA0A1B0GVH7 501 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 A0A1B0GVI7 797 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 LOC107986453A0A1B0GWG9 222 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 SYT7O43581 403 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 LMX1BO60663 402 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 ARL6IP5O75915 188 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 NCR1O76036 304 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 AGFG2O95081 481 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 ISG15P05161 165 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 UBCP0CG48 685 aaKnown RBP9.34□□□□□ -0.91
SP140-208ENST00000473711 COX5BP10606 129 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 CCL2P13500 99 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 SRMP19623 302 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 STOMP27105 288 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 SOX6P35712 828 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 CA7P43166 264 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 MTNR1BP49286 362 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 RORCP51449 518 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 HGFACQ04756 655 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 LSAMPQ13449 338 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 GFOD2Q3B7J2 385 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 DRAM2Q6UX65 266 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 COMMD2Q86X83 199 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 LIX1LQ8IVB5 337 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 CCDC36Q8IYA8 594 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 WDR31Q8NA23 367 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 OR13C3Q8NGS6 347 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 MCFD2Q8NI22 146 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 ASB5Q8WWX0 329 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 RND1Q92730 232 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 DMRTA2Q96SC8 542 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 KCNS3Q9BQ31 491 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 VKORC1Q9BQB6 163 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 SOX7Q9BT81 388 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 C1QTNF6Q9BXI9 259 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 BARHL1Q9BZE3 327 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 PIGMQ9H3S5 423 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 GPR84Q9NQS5 396 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 CCDC59Q9P031 241 aaKnown RBP9.34□□□□□ -0.91
SP140-208ENST00000473711 MEMO1Q9Y316 297 aa9.34□□□□□ -0.91
SP140-208ENST00000473711 NCOA6Q14686 2063 aaPredicted RBP9.34□□□□□ -0.91
SP140-208ENST00000473711 DSPP15924 2871 aaKnown RBP9.34□□□□□ -0.91
SP140-208ENST00000473711 ARPC4-TTLL3A0A0A6YYG9 625 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 C5orf49A4QMS7 147 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 A8MXE2 369 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 EEF1E1-BLOC1S5C9J1V9 151 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 CCL21O00585 134 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 MSTNO14793 375 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 EEF1E1O43324 174 aaKnown RBP9.33□□□□□ -0.92
SP140-208ENST00000473711 IL32P24001 234 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 MAPK3P27361 379 aaPredicted RBP9.33□□□□□ -0.92
SP140-208ENST00000473711 HOXC12P31275 282 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 APLNRP35414 380 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 OR10A3P58181 314 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 HNRNPA0Q13151 305 aaKnown RBP9.33□□□□□ -0.92
SP140-208ENST00000473711 MRPL49Q13405 166 aaKnown RBP9.33□□□□□ -0.92
SP140-208ENST00000473711 SNAI3Q3KNW1 292 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 TPRA1Q86W33 373 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 ZNF584Q8IVC4 421 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 C1orf162Q8NEQ5 155 aaPredicted RBP9.33□□□□□ -0.92
SP140-208ENST00000473711 TMEM106AQ96A25 262 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 SLC25A46Q96AG3 418 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 SGK3Q96BR1 496 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 FGGYQ96C11 551 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 BOD1Q96IK1 185 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 FAM71F1Q96KD3 344 aaPredicted RBP9.33□□□□□ -0.92
SP140-208ENST00000473711 LYZL4Q96KX0 146 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 SLIRPQ9GZT3 109 aaKnown RBP9.33□□□□□ -0.92
SP140-208ENST00000473711 OR10A2Q9H208 303 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 SP140LQ9H930 580 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 TCF7L1Q9HCS4 588 aa9.33□□□□□ -0.92
SP140-208ENST00000473711 ZNF629Q9UEG4 869 aaPredicted RBP9.33□□□□□ -0.92
SP140-208ENST00000473711 AK6Q9Y3D8 172 aaKnown RBP9.33□□□□□ -0.92
SP140-208ENST00000473711 HELZ2Q9BYK8 2649 aaKnown RBP9.32□□□□□ -0.92
SP140-208ENST00000473711 TRAV8-7A0A075B6U6 113 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 A0A0U1RQV5 110 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 A6NIN4 97 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 LILRA1O75019 489 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 CLPXO76031 633 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 RAF1P04049 648 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 SERPINA5P05154 406 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 CD2P06729 351 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 CELA3BP08861 270 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 CBR1P16152 277 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 RAB3BP20337 219 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 IDH3GP51553 393 aaPredicted RBP9.32□□□□□ -0.92
SP140-208ENST00000473711 FAM27E3Q08E93 113 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 ZNF404Q494X3 552 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 CEP78Q5JTW2 689 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 STAC2Q6ZMT1 411 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 DOK3Q7L591 496 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 OR52H1Q8NGJ2 320 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 TBC1D15Q8TC07 691 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 THRSPQ92748 146 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 POM121L2Q96KW2 1035 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 ZNF75AQ96N20 296 aa9.32□□□□□ -0.92
SP140-208ENST00000473711 NXF2Q9GZY0 626 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms