RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, human

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-210	ENST00000473311	TXNIP	Q9H3M7	391 aa		12.52	□□□□□ -0.41
ABCF3-210	ENST00000473311	TUBA4B	Q9H853	241 aa		12.52	□□□□□ -0.41
ABCF3-210	ENST00000473311	PDE7B	Q9NP56	450 aa		12.52	□□□□□ -0.41
ABCF3-210	ENST00000473311	MSRA	Q9UJ68	235 aa		12.52	□□□□□ -0.41
ABCF3-210	ENST00000473311	COA3	Q9Y2R0	106 aa	Predicted RBP	12.52	□□□□□ -0.41
ABCF3-210	ENST00000473311	PCDH15	Q96QU1	1955 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	EYS	Q5T1H1	3165 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	LOC100509620	A0A075B734	347 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	FITM1	A5D6W6	292 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	OR5H14	A6NHG9	310 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	HIST1H1B	P16401	226 aa	Known RBP	12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	PLCXD2	Q0VAA5	305 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	DHRS2	Q13268	280 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	OR6X1	Q8NH79	312 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	OR11A1	Q9GZK7	315 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	TMEM185B	Q9H7F4	350 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	UQCC1	Q9NVA1	299 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	HHLA2	Q9UM44	414 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	TMED7-TICAM2	A0A0A6YYA0	188 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	BTBD17	A6NE02	478 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	CCS	O14618	274 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	BCL2L11	O43521	198 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	OR2T1	O43869	369 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	HLA-A	P01891	365 aa	Known RBP	12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	CD34	P28906	385 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	DDT	P30046	118 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	GLO1	Q04760	184 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	KDM8	Q8N371	416 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	KDF1	Q8NAX2	398 aa	Predicted RBP	12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	ACBD4	Q8NC06	268 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	OR52N5	Q8NH56	324 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	ZNF721	Q8TF20	911 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	HIST1H2BA	Q96A08	127 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	TAAR9	Q96RI9	348 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	NUDT9	Q9BW91	350 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	C19orf12	Q9NSK7	152 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	VSX1	Q9NZR4	365 aa	Predicted RBP	12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	COMMD9	Q9P000	198 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	MMP17	Q9ULZ9	603 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	TMED7	Q9Y3B3	224 aa		12.51	□□□□□ -0.41
ABCF3-210	ENST00000473311	PPIH	O43447	177 aa	Known RBP	12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	DDAH2	O95865	285 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	IGKV3-11	P04433	115 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	IGFBP3	P17936	291 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	EN2	P19622	333 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	ATXN7L3	Q14CW9	347 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	C1orf140	Q5VVS0	124 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	CD163	Q86VB7	1156 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	ZNF584	Q8IVC4	421 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	PRSS58	Q8IYP2	241 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	OR4S1	Q8NGB4	309 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	OR5M8	Q8NGP6	311 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	SEC22A	Q96IW7	307 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	SLCO5A1	Q9H2Y9	848 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	NKX2-4	Q9H2Z4	354 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	ASF1B	Q9NVP2	202 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	CD207	Q9UJ71	328 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	KLK13	Q9UKR3	277 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	LOC107986453	A0A1B0GWG9	222 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	FGF16	O43320	207 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	CRTAP	O75718	401 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	MB	P02144	154 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	ZNF735	P0CB33	412 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	FST	P19883	344 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	EBP	Q15125	230 aa	Known RBP	12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	TAF13	Q15543	124 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	BEX5	Q5H9J7	111 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	TMEM71	Q6P5X7	295 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	PAPD4	Q6PIY7	484 aa	Known RBP	12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	STOML3	Q8TAV4	291 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	EDA	Q92838	391 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	S100PBP	Q96BU1	408 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	MALSU1	Q96EH3	234 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	C14orf79	Q96F83	325 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	SLC6A7	Q99884	636 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	TREM1	Q9NP99	234 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	CUTC	Q9NTM9	273 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	KCNIP3	Q9Y2W7	256 aa		12.5	□□□□□ -0.41
ABCF3-210	ENST00000473311	MEGF11	A6BM72	1044 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	ALG1L2	C9J202	215 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	SOX1	O00570	391 aa	Predicted RBP	12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	CRYAB	P02511	175 aa	Known RBP	12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	CEACAM6	P40199	344 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	POLR2H	P52434	150 aa	Known RBP	12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	COTL1	Q14019	142 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	CYB5R2	Q6BCY4	276 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	C9orf40	Q8IXQ3	194 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	CARF	Q8N187	725 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	ZNF383	Q8NA42	475 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	OR13C8	Q8NGS7	320 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	MMP26	Q9NRE1	261 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	CLEC1B	Q9P126	229 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	MMACHC	Q9Y4U1	282 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	LMX1B	O60663	402 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	DXO	O77932	396 aa	Known RBP	12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	AHSA1	O95433	338 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	CD8A	P01732	235 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	NQO2	P16083	231 aa		12.49	□□□□□ -0.41
ABCF3-210	ENST00000473311	ZNF823	P16415	610 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms