RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	ST7L	Q8TDW4	575 aa		12.53	□□□□□ -0.4
SSR4-208	ENST00000471880	DNAJC9	Q8WXX5	260 aa		12.53	□□□□□ -0.4
SSR4-208	ENST00000471880	LRTOMT	Q8WZ04	291 aa		12.53	□□□□□ -0.4
SSR4-208	ENST00000471880	NRBF2	Q96F24	287 aa		12.53	□□□□□ -0.4
SSR4-208	ENST00000471880	ABHD6	Q9BV23	337 aa		12.53	□□□□□ -0.4
SSR4-208	ENST00000471880	DDX28	Q9NUL7	540 aa	Known RBP	12.53	□□□□□ -0.4
SSR4-208	ENST00000471880	HIF1AN	Q9NWT6	349 aa		12.53	□□□□□ -0.4
SSR4-208	ENST00000471880	TMEM160	Q9NX00	188 aa		12.53	□□□□□ -0.4
SSR4-208	ENST00000471880	NPTN	Q9Y639	398 aa		12.53	□□□□□ -0.4
SSR4-208	ENST00000471880	CUBN	O60494	3623 aa		12.52	□□□□□ -0.4
SSR4-208	ENST00000471880	IQCF6	A8MYZ5	107 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	MITF	O75030	526 aa	Predicted RBP	12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	MRPL3	P09001	348 aa	Known RBP	12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	FCGR1A	P12314	374 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	ANPEP	P15144	967 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	PCMT1	P22061	227 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	GRB2	P62993	217 aa	Known RBP	12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	CDK5	Q00535	292 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	ZNF92	Q03936	586 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	APOF	Q13790	326 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	OR8G1	Q15617	311 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	GLYATL3	Q5SZD4	288 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	FAHD2B	Q6P2I3	314 aa	Predicted RBP	12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	FAM57B	Q71RH2	274 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	MOGAT3	Q86VF5	341 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	BBS1	Q8NFJ9	593 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	ZNF420	Q8TAQ5	688 aa	Predicted RBP	12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	UTP4	Q969X6	686 aa	Known RBP	12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	TMEM186	Q96B77	213 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	FAHD2A	Q96GK7	314 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	MEGF10	Q96KG7	1140 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	PRRG3	Q9BZD7	231 aa		12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	FBN1	P35555	2871 aa	Known RBP	12.52	□□□□□ -0.41
SSR4-208	ENST00000471880	SAC3D1	A6NKF1	404 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880		M0R129	80 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	MLNR	O43193	412 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	PRODH	O43272	600 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	ZNF205	O95201	554 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	CYB5R3	P00387	301 aa	Predicted RBP	12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	LYN	P07948	512 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	IRF2	P14316	349 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	CA6	P23280	308 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	DVL1P1	P54792	670 aa	Predicted RBP	12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	LMO4	P61968	165 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	PTGES3	Q15185	160 aa	Known RBP	12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	KRTAP27-1	Q3LI81	207 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	TEX30	Q5JUR7	227 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	COLCA1	Q6ZS62	124 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	KLHL36	Q8N4N3	616 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	PYDC1	Q8WXC3	89 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	DVL3	Q92997	716 aa	Predicted RBP	12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	PGAM5	Q96HS1	289 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	SLC30A2	Q9BRI3	323 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	ADAT1	Q9BUB4	502 aa	Known RBP	12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	TTTY10	Q9BZA0	68 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	SLC25A19	Q9HC21	320 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	UFSP2	Q9NUQ7	469 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	H2AFY2	Q9P0M6	372 aa	Predicted RBP	12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	LAMP5	Q9UJQ1	280 aa		12.51	□□□□□ -0.41
SSR4-208	ENST00000471880	MXRA5	Q9NR99	2828 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	C5orf63	A6NC05	138 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	CD300LB	A8K4G0	201 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	IGHV2-5	P01817	119 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	APOC1	P02654	83 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	MMP16	P51512	607 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	LCN2	P80188	198 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	LCN1P1	Q5VSP4	162 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	FAHD1	Q6P587	224 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	KRT77	Q7Z794	578 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	TIGD4	Q8IY51	512 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	BOLL	Q8N9W6	283 aa	Known RBP	12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	AMELY	Q99218	206 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	MDFI	Q99750	246 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	TOR3A	Q9H497	397 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	RIBC2	Q9H4K1	309 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	SP140L	Q9H930	580 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	GCM1	Q9NP62	436 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	DYSF	O75923	2080 aa		12.5	□□□□□ -0.41
SSR4-208	ENST00000471880	TRAV20	A0A0B4J274	112 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	LRRC30	A6NM36	301 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	EBAG9	O00559	213 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	XRCC2	O43543	280 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	PLPP2	O43688	288 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	ANOS1	P23352	680 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	HCCS	P53701	268 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	ZNF121	P58317	390 aa	Predicted RBP	12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	BTG1	P62324	171 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	ESRRG	P62508	458 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	PCK2	Q16822	640 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	SLC35D3	Q5M8T2	416 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	PRAMEF6	Q5VXH4	476 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	LRRN1	Q6UXK5	716 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	SPIC	Q8N5J4	248 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	OR56B2P	Q8NGI1	322 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	OR11L1	Q8NGX0	322 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	OTOS	Q8NHW6	89 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	RNF133	Q8WVZ7	376 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	REEP6	Q96HR9	211 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	IL4I1	Q96RQ9	567 aa		12.49	□□□□□ -0.41
SSR4-208	ENST00000471880	OR10A2	Q9H208	303 aa		12.49	□□□□□ -0.41

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