RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 GATA4P43694 442 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 VDAC2P45880 294 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-204ENST00000471488 GSK3BP49841 420 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 RAB13P51153 203 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 UBE2E1P51965 193 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 LGALS4P56470 323 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 MTPNP58546 118 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 PIN1Q13526 163 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-204ENST00000471488 GK2Q14410 553 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-204ENST00000471488 MEP1BQ16820 701 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 MICBQ29980 383 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 KRT71Q3SY84 523 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 CCDC92Q53HC0 331 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-204ENST00000471488 LRRC10Q5BKY1 277 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 WDR38Q5JTN6 314 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 PAGE3Q5JUK9 113 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 SLC36A1Q7Z2H8 476 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 OAFQ86UD1 273 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 MSRB3Q8IXL7 192 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 PCYOX1LQ8NBM8 494 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 C11orf65Q8NCR3 313 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 BEND2Q8NDZ0 799 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 OR8S1Q8NH09 359 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 Q8TCH9 128 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 LRRC29Q8WV35 223 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 LZICQ8WZA0 190 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 ERGIC1Q969X5 290 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 SEH1LQ96EE3 360 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 ZNF570Q96NI8 536 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 OR52B2Q96RD2 323 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 PITX2Q99697 317 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 PRSS27Q9BQR3 290 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 KRTAP17-1Q9BYP8 105 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 IKZF5Q9H5V7 419 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 RANBP3Q9H6Z4 567 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-204ENST00000471488 ABCB10Q9NRK6 738 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 SNTG1Q9NSN8 517 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 ADA2Q9NZK5 511 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 LGALS13Q9UHV8 139 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 RIMS3Q9UJD0 308 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 COA3Q9Y2R0 106 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-204ENST00000471488 ADAM18Q9Y3Q7 739 aa5.6□□□□□ -1.51
HDAC1-204ENST00000471488 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.59□□□□□ -1.51
HDAC1-204ENST00000471488 TEX13CA0A0J9YWL9 993 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 NKX6-3A6NJ46 265 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 ACOT8O14734 319 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 RGS16O15492 202 aaPredicted RBP5.59□□□□□ -1.51
HDAC1-204ENST00000471488 FSTL3O95633 263 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 CTLA4P16410 223 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 FAHP16930 419 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 YAP1P46937 504 aaKnown RBP5.59□□□□□ -1.51
HDAC1-204ENST00000471488 OR1E2P47887 323 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 CAPZA1P52907 286 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 RAB25P57735 213 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 COL10A1Q03692 680 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 ACSM1Q08AH1 577 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 MPP2Q14168 576 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 PCK2Q16822 640 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 NCR3LG1Q68D85 454 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 KCTD18Q6PI47 426 aaPredicted RBP5.59□□□□□ -1.51
HDAC1-204ENST00000471488 CPLX4Q7Z7G2 160 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 CENPVQ7Z7K6 275 aaPredicted RBP5.59□□□□□ -1.51
HDAC1-204ENST00000471488 NAA40Q86UY6 237 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 LINC00346Q8IVM7 164 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 GLB1L2Q8IW92 636 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 FAM185AQ8N0U4 392 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 GCSAMQ8N6F7 178 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 Q8N7P7 452 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 CELF2-AS1Q8N7Q2 184 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 DTX3Q8N9I9 347 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 SDR9C7Q8NEX9 313 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 OR5AU1Q8NGC0 362 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 OR9Q1Q8NGQ5 310 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 OR13C2Q8NGS9 318 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 OR2AE1Q8NHA4 323 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 ACOT11Q8WXI4 607 aaPredicted RBP5.59□□□□□ -1.51
HDAC1-204ENST00000471488 TFAP2CQ92754 450 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 BPIFA2Q96DR5 249 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 SPDL1Q96EA4 605 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 RCC1LQ96I51 464 aaKnown RBP5.59□□□□□ -1.51
HDAC1-204ENST00000471488 MAELQ96JY0 434 aaKnown RBP5.59□□□□□ -1.51
HDAC1-204ENST00000471488 Q96M85 177 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 ZNF649Q9BS31 505 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 CDCA4Q9BXL8 241 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 PRSS22Q9GZN4 317 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 TMEM38AQ9H6F2 299 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 ZNF702PQ9H963 129 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 ELL3Q9HB65 397 aaPredicted RBP5.59□□□□□ -1.51
HDAC1-204ENST00000471488 SDR39U1Q9NRG7 319 aaPredicted RBP5.59□□□□□ -1.51
HDAC1-204ENST00000471488 SERTAD4Q9NUC0 356 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 RHCGQ9UBD6 479 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 ZNF391Q9UJN7 358 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 HIF3AQ9Y2N7 669 aa5.59□□□□□ -1.51
HDAC1-204ENST00000471488 SF3B6Q9Y3B4 125 aaKnown RBP5.59□□□□□ -1.51
HDAC1-204ENST00000471488 NOP16Q9Y3C1 178 aaKnown RBP5.59□□□□□ -1.51
HDAC1-204ENST00000471488 ADARB2-AS1A8MUL3 147 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 EFCAB9A8MZ26 197 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 BHLHE40O14503 412 aa5.58□□□□□ -1.52
HDAC1-204ENST00000471488 SOCS2O14508 198 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms