RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 LCN6P62502 163 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 KRR1Q13601 381 aaKnown RBP11.49□□□□□ -0.57
HMGN1-211ENST00000471260 HFEQ30201 348 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 MEDAGQ5VYS4 303 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 RNLSQ5VYX0 342 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 GLCCI1Q86VQ1 547 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 GLB1L2Q8IW92 636 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 PHC2Q8IXK0 858 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 NPEPL1Q8NDH3 523 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 OR51F2Q8NH61 342 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 ABHD4Q8TB40 342 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 LGALS12Q96DT0 336 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 ELMOD3Q96FG2 381 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 FUZQ9BT04 418 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 CDCA4Q9BXL8 241 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 SLIRPQ9GZT3 109 aaKnown RBP11.49□□□□□ -0.57
HMGN1-211ENST00000471260 EGLN1Q9GZT9 426 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 NXF2Q9GZY0 626 aaKnown RBP11.49□□□□□ -0.57
HMGN1-211ENST00000471260 ATPIF1Q9UII2 106 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 KLHL21Q9UJP4 597 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 TRBV4-1A0A0J9YWV2 114 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 ZAR1LA6NP61 321 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 J3QW42 95 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 IMPA2O14732 288 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 SGCEO43556 437 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 SLC16A7O60669 478 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 DIRAS1O95057 198 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 GADD45GO95257 159 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 ABHD16AO95870 558 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 SCG5P05408 212 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 MSMBP08118 114 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 GAAP10253 952 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 CTLA4P16410 223 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 GSTM3P21266 225 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 CRABP1P29762 137 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 MPV17P39210 176 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 MAP2K4P45985 399 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 LMO4P61968 165 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 SLC3A1Q07837 685 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 TIGD6Q17RP2 521 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 ZNF181Q2M3W8 571 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 ZNF404Q494X3 552 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 LIPNQ5VXI9 398 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 DNM1P34Q6PK57 102 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 SMARCD3Q6STE5 483 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 IL17RELQ6ZVW7 336 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 RFPL4BQ6ZWI9 263 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 EGFL6Q8IUX8 553 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 RFLNBQ8N5W9 214 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 TEX29Q8N6K0 151 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 RAB1CQ92928 201 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 TMEM186Q96B77 213 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 RAB39BQ96DA2 213 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 TIMD4Q96H15 378 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 Q96MT0 163 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 DCSTAMPQ9H295 470 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 SYT4Q9H2B2 425 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 SP140LQ9H930 580 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 DAPK2Q9UIK4 370 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 GRIP1Q9Y3R0 1128 aa11.48□□□□□ -0.57
HMGN1-211ENST00000471260 UNC119BA6NIH7 251 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 METTL15A6NJ78 407 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 J3QRK9 145 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 AIREO43918 545 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 DOK2O60496 412 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 CDC14BO60729 498 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 NGFP01138 241 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 IGHV1-46P01743 117 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 CD55P08174 381 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 SRP14P37108 136 aaKnown RBP11.47□□□□□ -0.57
HMGN1-211ENST00000471260 IFNGR2P38484 337 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 ETV6P41212 452 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 HTR5AP47898 357 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 PPP5CP53041 499 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 SNRPGP62308 76 aaKnown RBP11.47□□□□□ -0.57
HMGN1-211ENST00000471260 ZNF45Q02386 682 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 SCGB2A2Q13296 93 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 SEC23BQ15437 767 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 KCNMB1Q16558 191 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 TSTQ16762 297 aaKnown RBP11.47□□□□□ -0.57
HMGN1-211ENST00000471260 SPATA46Q5T0L3 261 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 ACSM5Q6NUN0 579 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 THSD4Q6ZMP0 1018 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 GDPGP1Q6ZNW5 385 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 VASH1Q7L8A9 365 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-211ENST00000471260 STX19Q8N4C7 294 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 MCFD2Q8NI22 146 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 NDNFQ8TB73 568 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 RASD2Q96D21 266 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 DCLRE1CQ96SD1 692 aaKnown RBP11.47□□□□□ -0.57
HMGN1-211ENST00000471260 EMC7Q9NPA0 242 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 CLN6Q9NWW5 311 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 PLEK2Q9NYT0 353 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 TMCC3Q9ULS5 477 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 IER3IP1Q9Y5U9 82 aa11.47□□□□□ -0.57
HMGN1-211ENST00000471260 TRAV20A0A0B4J274 112 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 PNMA8CA0A1B0GUJ8 204 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 IRGMA1A4Y4 181 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 FAM157AC9JC47 383 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 WNT9BO14905 357 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms