RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 FLI1Q01543 452 aaPredicted RBP2.4□□□□□ -2.03
SSB-209ENST00000470621 DMC1Q14565 340 aa2.4□□□□□ -2.03
SSB-209ENST00000470621 YIF1BQ5BJH7 314 aa2.4□□□□□ -2.03
SSB-209ENST00000470621 C16orf47Q6ZP98 133 aaPredicted RBP2.4□□□□□ -2.03
SSB-209ENST00000470621 SNX31Q8N9S9 440 aa2.4□□□□□ -2.03
SSB-209ENST00000470621 GHSRQ92847 366 aa2.4□□□□□ -2.03
SSB-209ENST00000470621 SLC38A4Q969I6 547 aa2.4□□□□□ -2.03
SSB-209ENST00000470621 RASD2Q96D21 266 aa2.4□□□□□ -2.03
SSB-209ENST00000470621 C18orf15Q96N68 181 aa2.4□□□□□ -2.03
SSB-209ENST00000470621 SHANK2-AS3Q9BTD1 123 aa2.4□□□□□ -2.03
SSB-209ENST00000470621 TMEM38AQ9H6F2 299 aa2.4□□□□□ -2.03
SSB-209ENST00000470621 TMEM165Q9HC07 324 aa2.4□□□□□ -2.03
SSB-209ENST00000470621 CACNA1DQ01668 2161 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 TRBV11-1A0A0K0K1C0 115 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 SYCE1LA8MT33 242 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 CEACAM18A8MTB9 384 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 SLC9A3R1O14745 358 aaPredicted RBP2.39□□□□□ -2.03
SSB-209ENST00000470621 CNMDO75829 334 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 FTH1P02794 183 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 NTF3P20783 257 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 BCKDHBP21953 392 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 PSMB5P28074 263 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 ART3Q13508 389 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 PNOCQ13519 176 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 PGGHGQ32M88 737 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 TPTE2P1Q5T6R2 138 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 H3F3CQ6NXT2 135 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 TAS2R42Q7RTR8 314 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 CDH26Q8IXH8 852 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 OR6Q1Q8NGQ2 317 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 LINC00574Q9H8X3 128 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 RHBDL2Q9NX52 303 aa2.39□□□□□ -2.03
SSB-209ENST00000470621 A0A1B0GUH1 482 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 C9JVG2 144 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 AP3B1O00203 1094 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 TNFRSF11BO00300 401 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 PLIN3O60664 434 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 SYKP43405 635 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 LIPEQ05469 1076 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 SLC25A35Q3KQZ1 300 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 STK40Q8N2I9 435 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 TVP23CQ96ET8 276 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 MARVELD1Q9BSK0 173 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 ZNF442Q9H7R0 627 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 SLC39A1Q9NY26 324 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 ZNF230Q9UIE0 474 aaPredicted RBP2.38□□□□□ -2.03
SSB-209ENST00000470621 HPCAL4Q9UM19 191 aa2.38□□□□□ -2.03
SSB-209ENST00000470621 ZNF407Q9C0G0 2248 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 MPHOSPH10O00566 681 aaKnown RBP2.37□□□□□ -2.03
SSB-209ENST00000470621 CD28P10747 220 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 RAB7AP51149 207 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 KLHL12Q53G59 568 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 GCSAMLQ5JQS6 135 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 LRRC66Q68CR7 880 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 ZNF680Q8NEM1 530 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 KCNS1Q96KK3 526 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 C20orf24Q9BUV8 137 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 ACTR3CQ9C0K3 210 aaPredicted RBP2.37□□□□□ -2.03
SSB-209ENST00000470621 ACP6Q9NPH0 428 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 PTTG3PQ9NZH4 202 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 PDP1Q9P0J1 537 aaPredicted RBP2.37□□□□□ -2.03
SSB-209ENST00000470621 UBIAD1Q9Y5Z9 338 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 COL22A1Q8NFW1 1626 aaPredicted RBP2.37□□□□□ -2.03
SSB-209ENST00000470621 ZSWIM8A7E2V4 1837 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 NLRC5Q86WI3 1866 aa2.37□□□□□ -2.03
SSB-209ENST00000470621 IGHV3OR16-9A0A0B4J2B5 98 aa2.36□□□□□ -2.03
SSB-209ENST00000470621 CIB2O75838 187 aa2.36□□□□□ -2.03
SSB-209ENST00000470621 PGA4P0DJD7 388 aa2.36□□□□□ -2.03
SSB-209ENST00000470621 PGA3P0DJD8 388 aa2.36□□□□□ -2.03
SSB-209ENST00000470621 PGA5P0DJD9 388 aa2.36□□□□□ -2.03
SSB-209ENST00000470621 USF1P22415 310 aaPredicted RBP2.36□□□□□ -2.03
SSB-209ENST00000470621 ELF3P78545 371 aaPredicted RBP2.36□□□□□ -2.03
SSB-209ENST00000470621 MED27Q6P2C8 311 aa2.36□□□□□ -2.03
SSB-209ENST00000470621 DEGS2Q6QHC5 323 aa2.36□□□□□ -2.03
SSB-209ENST00000470621 OR9G4Q8NGQ1 327 aa2.36□□□□□ -2.03
SSB-209ENST00000470621 PANX1Q96RD7 426 aa2.36□□□□□ -2.03
SSB-209ENST00000470621 UQCC2Q9BRT2 126 aa2.36□□□□□ -2.03
SSB-209ENST00000470621 NUDT9Q9BW91 350 aa2.36□□□□□ -2.03
SSB-209ENST00000470621 PLA2G12AQ9BZM1 189 aa2.36□□□□□ -2.03
SSB-209ENST00000470621 RRAGDQ9NQL2 400 aaPredicted RBP2.36□□□□□ -2.03
SSB-209ENST00000470621 FHOD3Q2V2M9 1422 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 SYNJ2BP-COX16A0A087WUM0 186 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 A6NDN8 102 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 HUS1O60921 280 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 LSM8O95777 96 aaKnown RBP2.35□□□□□ -2.03
SSB-209ENST00000470621 CD160O95971 181 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 MYL2P10916 166 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 LGALS3P17931 250 aaKnown RBP2.35□□□□□ -2.03
SSB-209ENST00000470621 RAB4AP20338 218 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 PBLDP30039 288 aaPredicted RBP2.35□□□□□ -2.03
SSB-209ENST00000470621 UBE2E1P51965 193 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 ZNF121P58317 390 aaPredicted RBP2.35□□□□□ -2.03
SSB-209ENST00000470621 ARMC12Q5T9G4 340 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 TBPL2Q6SJ96 375 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 ZYG11AQ6WRX3 759 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 RTL4Q6ZR62 310 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 ZCCHC13Q8WW36 166 aaKnown RBP2.35□□□□□ -2.03
SSB-209ENST00000470621 HAUS1Q96CS2 278 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 PRRC1Q96M27 445 aa2.35□□□□□ -2.03
SSB-209ENST00000470621 SLC7A5P2Q9GIP4 190 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms