RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 ANKUB1A6NFN9 424 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 GAGE10A6NGK3 116 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 OR5B21A6NL26 309 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 IFITM5A6NNB3 132 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 ANKRD30BLA7E2S9 258 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF705EA8MWA4 302 aaPredicted RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 MCRIP1C9JLW8 97 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 FFAR3O14843 346 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 NBR2O15453 112 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 GPR42O15529 346 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 P2RX6O15547 441 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 FOXH1O75593 365 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 NCR1O76036 304 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 TOX4O94842 621 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 CDS2O95674 445 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 HAND1O96004 215 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 MBPP02686 304 aaPredicted RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 EDN1P05305 212 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 HIST1H1EP10412 219 aaKnown RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 FBLP22087 321 aaKnown RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 AZGP1P25311 298 aaKnown RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 OPRD1P41143 372 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 CDKN2BP42772 138 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 GPR6P46095 362 aaPredicted RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 RPL21P46778 160 aaKnown RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 GABRA2P47869 451 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 OR3A4PP47883 348 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 RPL29P47914 159 aaKnown RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 UQCRFS1P47985 274 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 AKR1C2P52895 323 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 HMGCS2P54868 508 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 PLP1P60201 277 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 HHEXQ03014 270 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 FZD2Q14332 565 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 CDO1Q16878 200 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 SPIN4Q56A73 249 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 CXorf66Q5JRM2 361 aaPredicted RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 COA6Q5JTJ3 125 aaKnown RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM211Q6ICI0 200 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 RGMBQ6NW40 437 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 RPL22L1Q6P5R6 122 aaKnown RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 TOMM20LQ6UXN7 152 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 HEPN1Q6WQI6 88 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 RPTNQ6XPR3 784 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 B3GLCTQ6Y288 498 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 COX15Q7KZN9 410 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 PARGQ86W56 976 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 AQP12AQ8IXF9 295 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 C20orf196Q8IYI0 205 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 GBGT1Q8N5D6 347 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF676Q8N7Q3 588 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 BMPERQ8N8U9 685 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 OR4K1Q8NGD4 311 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 OR5A2Q8NGI9 324 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 OR2Y1Q8NGV0 311 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 OR5K2Q8NHB8 316 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 SPRYD4Q8WW59 207 aaPredicted RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 ASB10Q8WXI3 467 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 DNASE2BQ8WZ79 361 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 FAM3CQ92520 227 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 ARL11Q969Q4 196 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 C16orf92Q96LL3 132 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 PSMG3Q9BT73 122 aaPredicted RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 PBDC1Q9BVG4 233 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 SELENOIQ9C0D9 397 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 SPRTNQ9H040 489 aaPredicted RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 SYT4Q9H2B2 425 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 DUSP21Q9H596 190 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 ZDHHC11Q9H8X9 412 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 SEC61A2Q9H9S3 476 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 SLC25A19Q9HC21 320 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 LYRM2Q9NU23 88 aaPredicted RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 TFCP2L1Q9NZI6 479 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 OR5AC2Q9NZP5 309 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 MUTYHQ9UIF7 546 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 AJAP1Q9UKB5 411 aaPredicted RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 ERG28Q9UKR5 140 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 PLAGL1Q9UM63 463 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 TNFSF18Q9UNG2 199 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 C14orf166Q9Y224 244 aaKnown RBP4.55□□□□□ -1.68
COL3A1-205ENST00000470167 SIGLEC9Q9Y336 463 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 OR10H1Q9Y4A9 318 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 TIMM10BQ9Y5J6 103 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 EP400Q96L91 3159 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 TRPM2O94759 1503 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 TULP4Q9NRJ4 1543 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 SIGLEC1Q9BZZ2 1709 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 USP6P35125 1406 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 C10orf71Q711Q0 1435 aa4.55□□□□□ -1.68
COL3A1-205ENST00000470167 A0A087WX48 190 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 A0A1B0GUS0 222 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 EXOC1LA0A1B0GW35 172 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FAM90A18PA6NE21 464 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FAM90A16PA6NEW6 464 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FAM90A9PA6NNJ1 464 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 FAM90A5PA8MXJ8 464 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF814B7Z6K7 855 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 J3QR06 171 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 OR7A17O14581 309 aa4.54□□□□□ -1.68
COL3A1-205ENST00000470167 CASKO14936 926 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms