RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 UQCC2Q9BRT2 126 aa8.2□□□□□ -1.1
SMC1A-205ENST00000469129 THAP7Q9BT49 309 aaPredicted RBP8.2□□□□□ -1.1
SMC1A-205ENST00000469129 OR2H1Q9GZK4 316 aa8.2□□□□□ -1.1
SMC1A-205ENST00000469129 RGCCQ9H4X1 137 aa8.2□□□□□ -1.1
SMC1A-205ENST00000469129 METTL17Q9H7H0 456 aaPredicted RBP8.2□□□□□ -1.1
SMC1A-205ENST00000469129 CALHM2Q9HA72 323 aa8.2□□□□□ -1.1
SMC1A-205ENST00000469129 TMEM138Q9NPI0 162 aa8.2□□□□□ -1.1
SMC1A-205ENST00000469129 GPR84Q9NQS5 396 aa8.2□□□□□ -1.1
SMC1A-205ENST00000469129 DIABLOQ9NR28 239 aa8.2□□□□□ -1.1
SMC1A-205ENST00000469129 SPRR3Q9UBC9 169 aa8.2□□□□□ -1.1
SMC1A-205ENST00000469129 WDFY3Q8IZQ1 3526 aa8.2□□□□□ -1.1
SMC1A-205ENST00000469129 AKAP13Q12802 2813 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 A0A0A6YYH2 397 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 A0A1B0GTI1 187 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 TMEM8BA6NDV4 472 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 A6NJ64 397 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 F5H5K5 113 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 GABARAPH6UMI1 98 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 EEF1E1O43324 174 aaKnown RBP8.19□□□□□ -1.1
SMC1A-205ENST00000469129 XRCC2O43543 280 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 DHRS3O75911 302 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 BPNT1O95861 308 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 ECDO95905 644 aaPredicted RBP8.19□□□□□ -1.1
SMC1A-205ENST00000469129 IGLV3-1P01715 115 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 ITGA5P08648 1049 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 COX5BP10606 129 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 RAB6AP20340 208 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 AGTR1P30556 359 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 CLDN12P56749 244 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 SPOCK1Q08629 439 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 MADCAM1Q13477 382 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 FAM189A2Q15884 450 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 C3AR1Q16581 482 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 GFOD2Q3B7J2 385 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 ASPHD2Q6ICH7 369 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 FAM166AQ6J272 317 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 ZNF529Q6P280 563 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 TMEM53Q6P2H8 277 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 Q6ZSR3 168 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 GDPD3Q7L5L3 318 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 PRSS45Q7RTY3 260 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 NRARPQ7Z6K4 114 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 TOMM5Q8N4H5 51 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 PNLDC1Q8NA58 520 aaKnown RBP8.19□□□□□ -1.1
SMC1A-205ENST00000469129 OR13C9Q8NGT0 318 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 DEDD2Q8WXF8 326 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 PP6455Q8WZ26 134 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 ITFG2Q969R8 447 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 ZNF837Q96EG3 531 aaPredicted RBP8.19□□□□□ -1.1
SMC1A-205ENST00000469129 FAM71F1Q96KD3 344 aaPredicted RBP8.19□□□□□ -1.1
SMC1A-205ENST00000469129 DOCK7Q96N67 2140 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 C11orf54Q9H0W9 315 aaPredicted RBP8.19□□□□□ -1.1
SMC1A-205ENST00000469129 SLC7A10Q9NS82 523 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 RBFOX1Q9NWB1 397 aaKnown RBP8.19□□□□□ -1.1
SMC1A-205ENST00000469129 NPAP1Q9NZP6 1156 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 CSAG2Q9Y5P2 127 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 V9GYS6 101 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 IGF2RP11717 2491 aa8.19□□□□□ -1.1
SMC1A-205ENST00000469129 FAM240BA0A1B0GVZ2 78 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 OR14I1A6ND48 311 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 MKRN2OSH3BPM6 223 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 XRCC3O43542 346 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 SS18L1O75177 396 aaPredicted RBP8.18□□□□□ -1.1
SMC1A-205ENST00000469129 ALX3O95076 343 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 ALDOBP05062 364 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 GSTT2BP0CG30 244 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 UBBP0CG47 229 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 SLC2A1P11166 492 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 GABRA1P14867 456 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 ARSBP15848 533 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 NTF4P34130 210 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 ARR3P36575 388 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 OR3A2P47893 321 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 TAS2R20P59543 309 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 ARF1P84077 181 aaKnown RBP8.18□□□□□ -1.1
SMC1A-205ENST00000469129 C11orf91Q3C1V1 193 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 KRTAP27-1Q3LI81 207 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 RNFT1Q5M7Z0 435 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 GLYATL3Q5SZD4 288 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 OR2A2Q6IF42 318 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 ZNF774Q6NX45 483 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 ANKRD16Q6P6B7 361 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 PLET1Q6UQ28 207 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 UTS2BQ765I0 119 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.18□□□□□ -1.1
SMC1A-205ENST00000469129 OR2W3Q7Z3T1 314 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 UBE2J2Q8N2K1 259 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 KDF1Q8NAX2 398 aaPredicted RBP8.18□□□□□ -1.1
SMC1A-205ENST00000469129 OR51D1Q8NGF3 324 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 AKAP1Q92667 903 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMC1A-205ENST00000469129 YIPF5Q969M3 257 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 ADAT3Q96EY9 351 aaPredicted RBP8.18□□□□□ -1.1
SMC1A-205ENST00000469129 ZFP3Q96NJ6 502 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 RNF121Q9H920 327 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 COPZ2Q9P299 210 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 CLCF1Q9UBD9 225 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 MRPS7Q9Y2R9 242 aaKnown RBP8.18□□□□□ -1.1
SMC1A-205ENST00000469129 N6AMT1Q9Y5N5 214 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 CACNG2Q9Y698 323 aa8.18□□□□□ -1.1
SMC1A-205ENST00000469129 FREM1Q5H8C1 2179 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms