RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 ILKQ13418 452 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 LDLRAD2Q5SZI1 272 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 PAGE2Q7Z2X7 111 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 LRRC75A-AS1Q8N1F1 130 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 ZNF606Q8WXB4 792 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 TOLLIPQ9H0E2 274 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 CLN8Q9UBY8 286 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 SH3BGRL2Q9UJC5 107 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 LSM7Q9UK45 103 aaKnown RBP0.4□□□□□ -2.35
SSB-208ENST00000468600 DDX49Q9Y6V7 483 aaKnown RBP0.4□□□□□ -2.35
SSB-208ENST00000468600 COL4A1P02462 1669 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 IGKV1-27A0A075B6S5 117 aa0.39□□□□□ -2.35
SSB-208ENST00000468600 TRGV4A0A0C4DH28 118 aa0.39□□□□□ -2.35
SSB-208ENST00000468600 IGKV2-29A2NJV5 120 aaPredicted RBP0.39□□□□□ -2.35
SSB-208ENST00000468600 CENPBD1B2RD01 187 aa0.39□□□□□ -2.35
SSB-208ENST00000468600 PSCAO43653 123 aa0.39□□□□□ -2.35
SSB-208ENST00000468600 PRKACBP22694 351 aa0.39□□□□□ -2.35
SSB-208ENST00000468600 OR12D2P58182 307 aa0.39□□□□□ -2.35
SSB-208ENST00000468600 PDK3Q15120 406 aa0.39□□□□□ -2.35
SSB-208ENST00000468600 ORMDL3Q8N138 153 aa0.39□□□□□ -2.35
SSB-208ENST00000468600 ZNF420Q8TAQ5 688 aaPredicted RBP0.39□□□□□ -2.35
SSB-208ENST00000468600 RAB3IL1Q8TBN0 382 aa0.39□□□□□ -2.35
SSB-208ENST00000468600 GHSRQ92847 366 aa0.39□□□□□ -2.35
SSB-208ENST00000468600 PLEKHF2Q9H8W4 249 aa0.39□□□□□ -2.35
SSB-208ENST00000468600 MALRD1Q5VYJ5 2156 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 DOCK10Q96BY6 2186 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 STRCP1A6NGW2 1772 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 PCP4L1A6NKN8 68 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 KCNK2O95069 426 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 CGB3P0DN86 165 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 PSMA5P28066 241 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 ACAA2P42765 397 aaKnown RBP0.38□□□□□ -2.35
SSB-208ENST00000468600 CRYBB2P43320 205 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 CCL23P55773 120 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 IMMTQ16891 758 aaKnown RBP0.38□□□□□ -2.35
SSB-208ENST00000468600 XKR7Q5GH72 579 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 C6orf226Q5I0X4 101 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 ZNF678Q5SXM1 525 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 C1orf185Q5T7R7 199 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 TGIF2LXQ8IUE1 241 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 ARL10Q8N8L6 244 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 C19orf18Q8NEA5 215 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 B3GNT7Q8NFL0 401 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 OR52E2Q8NGJ4 325 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 SLC7A13Q8TCU3 470 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 OTUB2Q96DC9 234 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 OR5B12Q96R08 314 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 ANKRD60Q9BZ19 345 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 MYOZ1Q9NP98 299 aaPredicted RBP0.38□□□□□ -2.35
SSB-208ENST00000468600 INIPQ9NRY2 104 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 FARSAQ9Y285 508 aaKnown RBP0.38□□□□□ -2.35
SSB-208ENST00000468600 SLC22A7Q9Y694 548 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 DOCK6Q96HP0 2047 aa0.38□□□□□ -2.35
SSB-208ENST00000468600 ZNF469Q96JG9 3925 aaPredicted RBP0.37□□□□□ -2.35
SSB-208ENST00000468600 IGHV3OR16-9A0A0B4J2B5 98 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 IGHMP01871 453 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 MAS1P04201 325 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 SERPINA5P05154 406 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 HSPA5P11021 654 aaKnown RBP0.37□□□□□ -2.35
SSB-208ENST00000468600 LGALS7P47929 136 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 ELP6Q0PNE2 266 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 TGFBIQ15582 683 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 C9orf135Q5VTT2 229 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 CD300LGQ6UXG3 332 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 FA2HQ7L5A8 372 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 EIF4E3Q8N5X7 224 aaKnown RBP0.37□□□□□ -2.35
SSB-208ENST00000468600 DNAAF3Q8N9W5 541 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 SDR9C7Q8NEX9 313 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 RNASE11Q8TAA1 199 aaKnown RBP0.37□□□□□ -2.35
SSB-208ENST00000468600 ENKURQ8TC29 256 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 GPR151Q8TDV0 419 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 KCNS1Q96KK3 526 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 OR4K3Q96R72 315 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 SLC39A3Q9BRY0 314 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 VSIRQ9H7M9 311 aa0.37□□□□□ -2.35
SSB-208ENST00000468600 FGF20Q9NP95 211 aaPredicted RBP0.37□□□□□ -2.35
SSB-208ENST00000468600 MYBPHLA2RUH7 354 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 IZUMO1RA6ND01 250 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 LYRM9A8MSI8 78 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 SMKR1H3BMG3 65 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 H3BQ85 93 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 MAGEB3O15480 346 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 FKBP6O75344 327 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 SERPIND1P05546 499 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 HTR1DP28221 377 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 PCK1P35558 622 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 DGCR6Q14129 220 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 SS18Q15532 418 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 TSC22D1Q15714 1073 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 LIN9Q5TKA1 542 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 RTL4Q6ZR62 310 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 MRPL55Q7Z7F7 128 aaKnown RBP0.36□□□□□ -2.35
SSB-208ENST00000468600 SLC25A29Q8N8R3 303 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 PRELID2Q8N945 189 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 GPR26Q8NDV2 337 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 STEAP2Q8NFT2 490 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 ZNF75AQ96N20 296 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 HIGD2AQ9BW72 106 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 LGALS13Q9UHV8 139 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 IKZF2Q9UKS7 526 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms