RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 KRTAP27-1Q3LI81 207 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 RIPPLY2Q5TAB7 128 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 SEM1Q6ZVN7 128 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 KBTBD8Q8NFY9 601 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 OR6Q1Q8NGQ2 317 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 ORAI1Q96D31 301 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 SLAMF6Q96DU3 332 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 VRK1Q99986 396 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-208ENST00000468300 LINC00470Q9BZP3 86 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 OR51B6Q9H340 312 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 SEC61A2Q9H9S3 476 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 EXOSC4Q9NPD3 245 aaKnown RBP7.25□□□□□ -1.25
BRCA1-208ENST00000468300 AKIP1Q9NQ31 210 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 SLC7A10Q9NS82 523 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 IL19Q9UHD0 177 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 SLC22A13Q9Y226 551 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 A0A1W2PRV1 198 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 RPL36A-HNRNPH2H7BZ11 118 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 SLC43A1O75387 559 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 NCR1O76036 304 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 CDRT1O95170 752 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 YES1P07947 543 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 UCHL1P09936 223 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF823P16415 610 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 GMFBP60983 142 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 MRPS34P82930 218 aaKnown RBP7.25□□□□□ -1.25
BRCA1-208ENST00000468300 ACSM3Q53FZ2 586 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 FAM27BQ5VT28 67 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 Q6ZNX1 250 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 BTLAQ7Z6A9 289 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 MFSD4AQ8N468 514 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 OR6N1Q8NGY5 312 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 NANPQ8TBE9 248 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 CPT1CQ8TCG5 803 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 COX4I2Q96KJ9 171 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 KCTD7Q96MP8 289 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 OR14A2Q96R54 314 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 SLC30A2Q9BRI3 323 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 ULBP2Q9BZM5 246 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 OPN3Q9H1Y3 402 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-208ENST00000468300 TMEM38BQ9NVV0 291 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF319Q9P2F9 582 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 CAMK2AQ9UQM7 478 aa7.25□□□□□ -1.25
BRCA1-208ENST00000468300 BTBD17A6NE02 478 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF503-AS2A6NEH8 195 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 DHFRP00374 187 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 FABP1P07148 127 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 TACSTD2P09758 323 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 AGTR1P30556 359 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 BCAP31P51572 246 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 BMXP51813 675 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 MXD1Q05195 221 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 HFEQ30201 348 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 ZMAT1Q5H9K5 638 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF627Q7L945 461 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 CEACAM19Q7Z692 300 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 RBM24Q9BX46 236 aaKnown RBP7.24□□□□□ -1.25
BRCA1-208ENST00000468300 IKZF2Q9UKS7 526 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF281Q9Y2X9 895 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 TTLL8A6PVC2 850 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 AKR7A2O43488 359 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 SNAPINO95295 136 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 IGHV3-9P01782 118 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 MSR1P21757 451 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 THBS2P35442 1172 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 RNPS1Q15287 305 aaKnown RBP7.24□□□□□ -1.25
BRCA1-208ENST00000468300 TRAM1Q15629 374 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 ADIPOQQ15848 244 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 DGUOKQ16854 277 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF404Q494X3 552 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 RTL6Q6ICC9 239 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 GPR137CQ8N3F9 429 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 LHFPL5Q8TAF8 219 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF596Q8TC21 504 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 DERL3Q96Q80 235 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 MROQ9BYG7 248 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 ZCCHC4Q9H5U6 513 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 CALHM2Q9HA72 323 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 B3GAT2Q9NPZ5 323 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 MCTS1Q9ULC4 181 aaKnown RBP7.24□□□□□ -1.25
BRCA1-208ENST00000468300 R4GMQ9 66 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 A3GALT2U3KPV4 340 aa7.24□□□□□ -1.25
BRCA1-208ENST00000468300 TRBV5-7A0A0A0MS05 114 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 A0A1W2PPK0 400 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 GPRIN2O60269 458 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 SS18L1O75177 396 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 SYNGR4O95473 234 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 CTSSP25774 331 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 OTX1P32242 354 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-208ENST00000468300 DCTDP32321 178 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 MMP16P51512 607 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 TDGF1P3P51864 188 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 OR10A3P58181 314 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 HGFACQ04756 655 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 GPR176Q14439 515 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 CEACAM16Q2WEN9 425 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 YIF1BQ5BJH7 314 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 ZNF813Q6ZN06 617 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 SYT9Q86SS6 491 aa7.23□□□□□ -1.25
BRCA1-208ENST00000468300 NAA40Q86UY6 237 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms