RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 POLR3KQ9Y2Y1 108 aaPredicted RBP16.06■□□□□ 0.16
COL7A1-207ENST00000467985 COMMD3-BMI1R4GMX3 469 aa16.06■□□□□ 0.16
COL7A1-207ENST00000467985 ARRDC5A6NEK1 342 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 MLNRO43193 412 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 SOX14O95416 240 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 FSTL3O95633 263 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 ZNF3P17036 446 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 OTX1P32242 354 aaPredicted RBP16.05■□□□□ 0.16
COL7A1-207ENST00000467985 SLC6A9P48067 706 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 ENTPD1P49961 510 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 CRMP1Q14194 572 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 ATP6AP1Q15904 470 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 PCK2Q16822 640 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 TEX30Q5JUR7 227 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 MRPL21Q7Z2W9 205 aaKnown RBP16.05■□□□□ 0.16
COL7A1-207ENST00000467985 OR10G2Q8NGC3 310 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 OR51L1Q8NGJ5 315 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 OR10S1Q8NGN2 331 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 OR9Q1Q8NGQ5 310 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 OR4Q3Q8NH05 313 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 GIPC3Q8TF64 312 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 SPRYD4Q8WW59 207 aaPredicted RBP16.05■□□□□ 0.16
COL7A1-207ENST00000467985 LRTOMTQ8WZ04 291 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 ERGIC1Q969X5 290 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 SLC22A4Q9H015 551 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 RRP15Q9Y3B9 282 aaKnown RBP16.05■□□□□ 0.16
COL7A1-207ENST00000467985 NBEAL1Q6ZS30 2694 aa16.05■□□□□ 0.16
COL7A1-207ENST00000467985 F5H0A9 414 aaPredicted RBP16.04■□□□□ 0.16
COL7A1-207ENST00000467985 F5H5P2 479 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 H0YL77 283 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 SPI1P17947 270 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 ZFP36P26651 326 aaKnown RBP16.04■□□□□ 0.16
COL7A1-207ENST00000467985 GATA4P43694 442 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 RCN1Q15293 331 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 TAF13Q15543 124 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 ESCO2Q56NI9 601 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 DCXRQ7Z4W1 244 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 AMIGO2Q86SJ2 522 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 NAA40Q86UY6 237 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 MOGAT3Q86VF5 341 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 TEX47Q8TBZ9 253 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 ZNRF4Q8WWF5 429 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 JMJD8Q96S16 334 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 COPS4Q9BT78 406 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 CMC2Q9NRP2 79 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 LRCH1Q9Y2L9 728 aa16.04■□□□□ 0.16
COL7A1-207ENST00000467985 A8MXK9 166 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 H3BNX3 289 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 ZNF593O00488 134 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-207ENST00000467985 GYPBP06028 91 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 SPARCP09486 303 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 IRF2P14316 349 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 RPS27P42677 84 aaKnown RBP16.03■□□□□ 0.16
COL7A1-207ENST00000467985 SLC15A1P46059 708 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 RAD23AP54725 363 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 SEMA6DQ8NFY4 1073 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 OR6K6Q8NGW6 343 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 SLAMF6Q96DU3 332 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 FEVQ99581 238 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 SUCNR1Q9BXA5 334 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 SEMA6AQ9H2E6 1030 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 OPA3Q9H6K4 179 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 OPN4Q9UHM6 478 aa16.03■□□□□ 0.16
COL7A1-207ENST00000467985 CEACAM18A8MTB9 384 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 ZNF878C9JN71 531 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 H3BN98 237 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 GMDSO60547 372 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 VENTXO95231 258 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 HLA-DPB1P04440 258 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 ADRA2CP18825 462 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 GRK5P34947 590 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 CD200P41217 278 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 HILS1P60008 231 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 GRB2P62993 217 aaKnown RBP16.02■□□□□ 0.16
COL7A1-207ENST00000467985 HNRNPA0Q13151 305 aaKnown RBP16.02■□□□□ 0.16
COL7A1-207ENST00000467985 LYPD4Q6UWN0 246 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 ZNF511Q8NB15 262 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 OR11L1Q8NGX0 322 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 ZNF420Q8TAQ5 688 aaPredicted RBP16.02■□□□□ 0.16
COL7A1-207ENST00000467985 CENPNQ96H22 339 aaPredicted RBP16.02■□□□□ 0.16
COL7A1-207ENST00000467985 KCNJ15Q99712 375 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 PKP2Q99959 881 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 NIPSNAP1Q9BPW8 284 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 SP140LQ9H930 580 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 TMEM165Q9HC07 324 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 KIF17Q9P2E2 1029 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 MIOXQ9UGB7 285 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 OR5V1Q9UGF6 321 aa16.02■□□□□ 0.16
COL7A1-207ENST00000467985 CD300LBA8K4G0 201 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 CYB5R3P00387 301 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-207ENST00000467985 FSHBP01225 129 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 APOC1P02654 83 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 WNT2P09544 360 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 RPS2P15880 293 aaKnown RBP16.01■□□□□ 0.15
COL7A1-207ENST00000467985 PAICSP22234 425 aaKnown RBP16.01■□□□□ 0.15
COL7A1-207ENST00000467985 FPR2P25090 351 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 OR8G1Q15617 311 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 SNAI3Q3KNW1 292 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 PQLC1Q8N2U9 271 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 BPIFB2Q8N4F0 458 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms