RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 HCP5Q6MZN7 132 aa8.24□□□□□ -1.09
HDAC3-203ENST00000467533 COLCA1Q6ZS62 124 aa8.24□□□□□ -1.09
HDAC3-203ENST00000467533 ARMC8Q8IUR7 673 aa8.24□□□□□ -1.09
HDAC3-203ENST00000467533 SMYD1Q8NB12 490 aa8.24□□□□□ -1.09
HDAC3-203ENST00000467533 PFN4Q8NHR9 129 aa8.24□□□□□ -1.09
HDAC3-203ENST00000467533 TCP10LQ8TDR4 215 aa8.24□□□□□ -1.09
HDAC3-203ENST00000467533 EPS8L3Q8TE67 593 aaKnown RBP8.24□□□□□ -1.09
HDAC3-203ENST00000467533 SPRYD4Q8WW59 207 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-203ENST00000467533 MPP4Q96JB8 637 aa8.24□□□□□ -1.09
HDAC3-203ENST00000467533 ABCB10Q9NRK6 738 aa8.24□□□□□ -1.09
HDAC3-203ENST00000467533 PITPNC1Q9UKF7 332 aa8.24□□□□□ -1.09
HDAC3-203ENST00000467533 HERC2O95714 4834 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 TRAPPC13A5PLN9 417 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 H7C1C5 153 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 CLIC1O00299 241 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 ACOT8O14734 319 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 ITM2AO43736 263 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 SERPINB7O75635 380 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 SLC22A3O75751 556 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 LHBP01229 141 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 SHBGP04278 402 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 SELLP14151 372 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 RPL27P61353 136 aaKnown RBP8.23□□□□□ -1.09
HDAC3-203ENST00000467533 LCN6P62502 163 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 BLCAPP62952 87 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 IL5RAQ01344 420 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 GK2Q14410 553 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-203ENST00000467533 CCDC92Q53HC0 331 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-203ENST00000467533 ALG10Q5BKT4 473 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 OTPQ5XKR4 325 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 OGFOD2Q6N063 350 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 ETV3LQ6ZN32 361 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 KRT77Q7Z794 578 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 PLPP7Q8NBV4 271 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 OR5D13Q8NGL4 314 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 OR6T1Q8NGN1 323 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 RPS4Y2Q8TD47 263 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 SGTBQ96EQ0 304 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 CITED4Q96RK1 184 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 ZNF426Q9BUY5 554 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 SLC22A4Q9H015 551 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 ATPIF1Q9UII2 106 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 STARD9Q9P2P6 4700 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 PCLOQ9Y6V0 5065 aa8.23□□□□□ -1.09
HDAC3-203ENST00000467533 A6NDX4 124 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 SPAG7O75391 227 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 PTBP3O95758 552 aaKnown RBP8.22□□□□□ -1.09
HDAC3-203ENST00000467533 MT-ND1P03886 318 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 MUC1P15941 1255 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-203ENST00000467533 POU1F1P28069 291 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 RAB13P51153 203 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 LGALS4P56470 323 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 MALLQ13021 153 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 SCARB2Q14108 478 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 LAPTM4AQ15012 233 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 PGAP1Q75T13 922 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 MRPL21Q7Z2W9 205 aaKnown RBP8.22□□□□□ -1.09
HDAC3-203ENST00000467533 LRRC8CQ8TDW0 803 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 LRRC29Q8WV35 223 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 SLCO4A1Q96BD0 722 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 ISOC1Q96CN7 298 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 MYLK2Q9H1R3 596 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 GRPEL1Q9HAV7 217 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 POLR1DQ9Y2S0 133 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 NDUFAF1Q9Y375 327 aa8.22□□□□□ -1.09
HDAC3-203ENST00000467533 HUWE1Q7Z6Z7 4374 aaKnown RBP8.22□□□□□ -1.09
HDAC3-203ENST00000467533 A6NIZ1 184 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 NKX6-3A6NJ46 265 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 RER1O15258 196 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 POLR3GO15318 223 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-203ENST00000467533 GMDSO60547 372 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 GLCEO94923 617 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 BPGMP07738 259 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 FAM153BP0C7A2 387 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 NDUFB7P17568 137 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 ECI1P42126 302 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 THBS3P49746 956 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 RPL14P50914 215 aaKnown RBP8.21□□□□□ -1.1
HDAC3-203ENST00000467533 RAP1BP61224 184 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 RAP1AP62834 184 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 MSANTD1Q6ZTZ1 278 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 TSPYL5Q86VY4 417 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-203ENST00000467533 RBM45Q8IUH3 476 aaKnown RBP8.21□□□□□ -1.1
HDAC3-203ENST00000467533 SBSPONQ8IVN8 264 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 GOLGA6L1Q8N7Z2 621 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 OR9Q1Q8NGQ5 310 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 DUS3LQ96G46 650 aaKnown RBP8.21□□□□□ -1.1
HDAC3-203ENST00000467533 PRSS27Q9BQR3 290 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 PAIP1Q9H074 479 aaKnown RBP8.21□□□□□ -1.1
HDAC3-203ENST00000467533 ZMAT4Q9H898 229 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 SLC25A10Q9UBX3 287 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-203ENST00000467533 RAP2CQ9Y3L5 183 aa8.21□□□□□ -1.1
HDAC3-203ENST00000467533 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-203ENST00000467533 VGLL3A8MV65 326 aa8.2□□□□□ -1.1
HDAC3-203ENST00000467533 TSPAN19P0C672 248 aa8.2□□□□□ -1.1
HDAC3-203ENST00000467533 CD247P20963 164 aa8.2□□□□□ -1.1
HDAC3-203ENST00000467533 COX7A1P24310 79 aa8.2□□□□□ -1.1
HDAC3-203ENST00000467533 LUMP51884 338 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-203ENST00000467533 RAB25P57735 213 aa8.2□□□□□ -1.1
HDAC3-203ENST00000467533 CTXN1P60606 82 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms