RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 TGFBR1P36897 503 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 NBL1P41271 181 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 PIGHQ14442 188 aaPredicted RBP1.74□□□□□ -2.13
ATG3-204ENST00000467275 BEX5Q5H9J7 111 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 FAM78AQ5JUQ0 283 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 PRMT9Q6P2P2 845 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 COX18Q8N8Q8 333 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 BBOF1Q8ND07 529 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 OR51E1Q8TCB6 317 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 AGR3Q8TD06 166 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 GLYATL2Q8WU03 294 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 RTN4IP1Q8WWV3 396 aaPredicted RBP1.74□□□□□ -2.13
ATG3-204ENST00000467275 RPEQ96AT9 228 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 NEURL3Q96EH8 262 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 TVP23CQ96ET8 276 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 JSRP1Q96MG2 331 aaPredicted RBP1.74□□□□□ -2.13
ATG3-204ENST00000467275 OPALINQ96PE5 141 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 ZNF317Q96PQ6 595 aaPredicted RBP1.74□□□□□ -2.13
ATG3-204ENST00000467275 NCOR1P1Q9H4R4 102 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 BEX1Q9HBH7 125 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 AHSPQ9NZD4 102 aa1.74□□□□□ -2.13
ATG3-204ENST00000467275 MYEF2Q9P2K5 600 aaKnown RBP1.74□□□□□ -2.13
ATG3-204ENST00000467275 RABL2AQ9UBK7 228 aaPredicted RBP1.74□□□□□ -2.13
ATG3-204ENST00000467275 TTC41PQ6P2S7 1318 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 IGHV3OR16-9A0A0B4J2B5 98 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 GOLGA6L7A0A1B0GV03 622 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 NCF1BA6NI72 391 aaPredicted RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 PDZK1P1A8MUH7 402 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 NCF1CA8MVU1 366 aaPredicted RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 SUPT3HB4E1H0 165 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 GOLGA8TH3BQL2 631 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 GABRPO00591 440 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 NVLO15381 856 aaKnown RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 ERI3O43414 337 aaKnown RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 TACSTD2P09758 323 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 OR56A5P0C7T3 313 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 UBCP0CG48 685 aaKnown RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 STAG3L3P0CL85 134 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 USF1P22415 310 aaPredicted RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 CLDN8P56748 225 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 CLDN18P56856 261 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 VSX2P58304 361 aaPredicted RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 ZNF121P58317 390 aaPredicted RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 UBE2MP61081 183 aaKnown RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 RAD51Q06609 339 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 SPAG1Q07617 926 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 TRMT5Q32P41 509 aaKnown RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 SMUG1Q53HV7 270 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 C12orf54Q6X4T0 127 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 FAM122BQ7Z309 247 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 MRPL55Q7Z7F7 128 aaKnown RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 CDKL3Q8IVW4 592 aaPredicted RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 FAM71AQ8IYT1 594 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 LRRC75AQ8NAA5 344 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 OR6Q1Q8NGQ2 317 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 OR6N1Q8NGY5 312 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 OR8U1Q8NH10 309 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 COQ8AQ8NI60 647 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 GPX8Q8TED1 209 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 NRBF2Q96F24 287 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 NARS2Q96I59 477 aaKnown RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 RNF145Q96MT1 663 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 TIMM17AQ99595 171 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 TIMM29Q9BSF4 260 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 SAMD10Q9BYL1 202 aa1.73□□□□□ -2.13
ATG3-204ENST00000467275 DDX19AQ9NUU7 478 aaKnown RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 MRPL22Q9NWU5 206 aaKnown RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 TSSC4Q9Y5U2 329 aaPredicted RBP1.73□□□□□ -2.13
ATG3-204ENST00000467275 ZNF407Q9C0G0 2248 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 IGKV1-8A0A0C4DH67 115 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 A0A0J9YXV3 536 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 A0A1B0GTQ1 180 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 A0A1W2PRD5 423 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 TSPAN11A1L157 253 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 BCKDKO14874 412 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 REM1O75628 298 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 SEMA3DO95025 777 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 APCSP02743 223 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 IFNW1P05000 195 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 PGA4P0DJD7 388 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 PGA3P0DJD8 388 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 RFC3P40938 356 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 SLC1A2P43004 574 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 MAGEA1P43355 309 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 FABP6P51161 128 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 RPS15AP62244 130 aaKnown RBP1.72□□□□□ -2.13
ATG3-204ENST00000467275 RPS23P62266 143 aaKnown RBP1.72□□□□□ -2.13
ATG3-204ENST00000467275 FLI1Q01543 452 aaPredicted RBP1.72□□□□□ -2.13
ATG3-204ENST00000467275 RPEL1Q2QD12 228 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 PIP5KL1Q5T9C9 394 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 TMCO2Q7Z6W1 182 aaPredicted RBP1.72□□□□□ -2.13
ATG3-204ENST00000467275 HORMAD1Q86X24 394 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 CALHM1Q8IU99 346 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 NKAIN4Q8IVV8 208 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 MICU2Q8IYU8 434 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 CBR4Q8N4T8 237 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 LRRC52Q8N7C0 313 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 OR11H7Q8NGC8 314 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 OR4K5Q8NGD3 323 aa1.72□□□□□ -2.13
ATG3-204ENST00000467275 OR10W1Q8NGF6 305 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms