RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 DCAKDQ8WVC6 231 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 C10orf82Q8WW14 230 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 PIH1D2Q8WWB5 315 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 HGDQ93099 445 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM186Q96B77 213 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 C5orf30Q96GV9 206 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 BTN2A3PQ96KV6 586 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 HYLS1Q96M11 299 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM56Q96MV1 263 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 NOL4LQ96MY1 436 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 SIGLEC12Q96PQ1 595 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 SLC38A2Q96QD8 506 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 PANX3Q96QZ0 392 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 OR5B2Q96R09 309 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 OR52B2Q96RD2 323 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 CNN2Q99439 309 aaKnown RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 VAT1Q99536 393 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 AGPAT1Q99943 283 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 APOL4Q9BPW4 351 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 NDUFAF3Q9BU61 184 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 OSBPL11Q9BXB4 747 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 REG4Q9BYZ8 158 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 ROPN1BQ9BZX4 212 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 NXF2Q9GZY0 626 aaKnown RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 COMMD4Q9H0A8 199 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 RAB1BQ9H0U4 201 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 DCSTAMPQ9H295 470 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 ZDHHC6Q9H6R6 413 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 WDR55Q9H6Y2 383 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 NHEJ1Q9H9Q4 299 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 ROPN1Q9HAT0 212 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 FAM49BQ9NUQ9 324 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 LYARQ9NX58 379 aaKnown RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 RDH8Q9NYR8 311 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 PTTG3PQ9NZH4 202 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 DHCR7Q9UBM7 475 aaKnown RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 PCYOX1Q9UHG3 505 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 GNG8Q9UK08 70 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 SLC7A11Q9UPY5 501 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM56-RWDD3S4R434 201 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 U3KQ87 197 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 MROH1Q8NDA8 1641 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 ABCA8O94911 1581 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 SYCP2Q9BX26 1530 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 COL16A1Q07092 1604 aaPredicted RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 FAM220BPB1ANY3 271 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 SMLR1H3BR10 107 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 K7EQM0 130 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 WWP2O00308 870 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ARPC3O15145 178 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 RNF13O43567 381 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 KDELR3O43731 214 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 VPS26AO75436 327 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 OR2J2O76002 312 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ATG12O94817 140 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 BRI3O95415 125 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 CXCL14O95715 111 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 CPNE6O95741 557 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 AP2A1O95782 977 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 IGF2P01344 180 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 IFNA17P01571 189 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ABHD2P08910 425 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 UROSP10746 265 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 HLA-EP13747 358 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 GABRA1P14867 456 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 KCNE1P15382 129 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 SPNP16150 400 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 HIST1H1BP16401 226 aaKnown RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 TAC1P20366 129 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 BCKDHBP21953 392 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 HLA-DMAP28067 261 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 OTX2P32243 289 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 MDH2P40926 338 aaKnown RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ETV6P41212 452 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 P2RY2P41231 377 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ARRB1P49407 418 aaPredicted RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 RAB5CP51148 216 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 WNT4P56705 351 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 KLF3P57682 345 aaPredicted RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 MLF1P58340 268 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 CDC42P60953 191 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 TFAMQ00059 246 aaKnown RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 CDKL1Q00532 357 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 PAX2Q02962 417 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 EMX2Q04743 252 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 DGUOKQ16854 277 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ATP6V1FQ16864 119 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 TATDN3Q17R31 274 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 IMPG1Q17R60 797 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 UNC50Q53HI1 259 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 GPRC6AQ5T6X5 926 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 SYT6Q5T7P8 510 aaPredicted RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 C1orf189Q5VU69 101 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 TRIQKQ629K1 86 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 APOBEC3HQ6NTF7 200 aaKnown RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ATRAIDQ6UW56 229 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 DPY19L2P2Q6ZN68 376 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF836Q6ZNA1 936 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 Q6ZRG5 221 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ABHD13Q7L211 337 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms