RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 WT1P19544 449 aaPredicted RBP11.9□□□□□ -0.5
UBE4B-206ENST00000466379 RAB3AP20336 220 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 PPIAP62937 165 aaKnown RBP11.9□□□□□ -0.5
UBE4B-206ENST00000466379 MOGAT2Q3SYC2 334 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 SFRP5Q5T4F7 317 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 FAM27BQ5VT28 67 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 ZBTB8BQ8NAP8 495 aaPredicted RBP11.9□□□□□ -0.5
UBE4B-206ENST00000466379 PHF21AQ96BD5 680 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 BEX1Q9HBH7 125 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 TMEM138Q9NPI0 162 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 NKIRAS2Q9NYR9 191 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 KLF13Q9Y2Y9 288 aaPredicted RBP11.9□□□□□ -0.5
UBE4B-206ENST00000466379 NUBP2Q9Y5Y2 271 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 ZNF407Q9C0G0 2248 aa11.9□□□□□ -0.51
UBE4B-206ENST00000466379 ANKRD20A5PA0PJZ0 165 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 LRP3O75074 770 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 ALDOBP05062 364 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 ZNF708P17019 499 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 NUBP1P53384 320 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 ARG2P78540 354 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 ZNF774Q6NX45 483 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 FGFBP3Q8TAT2 258 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 FAM46BQ96A09 425 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 SORCS2Q96PQ0 1159 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 C7orf50Q9BRJ6 194 aaKnown RBP11.89□□□□□ -0.51
UBE4B-206ENST00000466379 DEFB127Q9H1M4 99 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 ZMAT3Q9HA38 289 aaKnown RBP11.89□□□□□ -0.51
UBE4B-206ENST00000466379 NEK6Q9HC98 313 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 MCUBQ9NWR8 336 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 ELF5Q9UKW6 265 aaPredicted RBP11.89□□□□□ -0.51
UBE4B-206ENST00000466379 FLVCR2Q9UPI3 526 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 ZFHX4Q86UP3 3567 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 M0R135 149 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 LDLRAD4O15165 306 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 ECDO95905 644 aaPredicted RBP11.89□□□□□ -0.51
UBE4B-206ENST00000466379 CTSSP25774 331 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 BTG1P62324 171 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 MRPS10P82664 201 aaKnown RBP11.89□□□□□ -0.51
UBE4B-206ENST00000466379 ZNF529Q6P280 563 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 OR5AS1Q8N127 324 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 AKR7LQ8NHP1 331 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 FNDC9Q8TBE3 224 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 CPT1CQ8TCG5 803 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 ZNF799Q96GE5 643 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 FOXB1Q99853 325 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 GPR35Q9HC97 309 aa11.89□□□□□ -0.51
UBE4B-206ENST00000466379 NOSIPQ9Y314 301 aaKnown RBP11.89□□□□□ -0.51
UBE4B-206ENST00000466379 LOC400499M0QZD8 3231 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 LINC01387J3KSC0 135 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 SGCEO43556 437 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 CD46P15529 392 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 ZNF32P17041 273 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 CCL1P22362 96 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 CD82P27701 267 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 HGFACQ04756 655 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 PMPCAQ10713 525 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 PCGF3Q3KNV8 242 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 SNAI3Q3KNW1 292 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 TSPO2Q5TGU0 170 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 C9orf135Q5VTT2 229 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 DOK3Q7L591 496 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 TUSC5Q8IXB3 177 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 SLC22A24Q8N4F4 322 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 ACBD4Q8NC06 268 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 OR14K1Q8NGZ2 314 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 TP63Q9H3D4 680 aaPredicted RBP11.88□□□□□ -0.51
UBE4B-206ENST00000466379 ZNF552Q9H707 407 aaPredicted RBP11.88□□□□□ -0.51
UBE4B-206ENST00000466379 METTL17Q9H7H0 456 aaPredicted RBP11.88□□□□□ -0.51
UBE4B-206ENST00000466379 CALHM2Q9HA72 323 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 SLC17A5Q9NRA2 495 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 KLRC4-KLRK1H3BQV0 150 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 H2AFB2P0C5Z0 115 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 GABRA1P14867 456 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 ZNF93P35789 620 aaPredicted RBP11.88□□□□□ -0.51
UBE4B-206ENST00000466379 CCL11P51671 97 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 PRSS12P56730 875 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 AP3S2P59780 193 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 RRAS2P62070 204 aaPredicted RBP11.88□□□□□ -0.51
UBE4B-206ENST00000466379 UNC119Q13432 240 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 ZFP69Q49AA0 526 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 RNFT1Q5M7Z0 435 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 DNM1P46Q6ZS02 220 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 PAQR4Q8N4S7 273 aaPredicted RBP11.88□□□□□ -0.51
UBE4B-206ENST00000466379 MEIOBQ8N635 442 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 BEST4Q8NFU0 473 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 NPRL2Q8WTW4 380 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 FOXRED1Q96CU9 486 aaPredicted RBP11.88□□□□□ -0.51
UBE4B-206ENST00000466379 C20orf85Q9H1P6 137 aa11.88□□□□□ -0.51
UBE4B-206ENST00000466379 PTPRBP23467 1997 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 H7C417 338 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 MRPL33O75394 65 aaKnown RBP11.87□□□□□ -0.51
UBE4B-206ENST00000466379 RBBP9O75884 186 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 DHFRP00374 187 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 CST2P09228 141 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 LIPCP11150 499 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 OR3A4PP47883 348 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 PMP22Q01453 160 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 ZNF766Q5HY98 468 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 AWAT2Q6E213 333 aa11.87□□□□□ -0.51
UBE4B-206ENST00000466379 BTN2A1Q7KYR7 527 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms