RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 NR4A2P43354 598 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 ZNF84P51523 738 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 MNAT1P51948 309 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 NUDT6P53370 316 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 BNIP1Q12981 228 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 TSPAN31Q12999 210 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 ATRQ13535 2644 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 RAB35Q15286 201 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 TAF11Q15544 211 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 EFNB3Q15768 340 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 MICAQ29983 383 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 ANKDD1AQ495B1 522 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 CCDC92Q53HC0 331 aaPredicted RBP4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 C1QTNF12Q5T7M4 302 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 OR2T5Q6IEZ7 315 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 TMEM53Q6P2H8 277 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 LEG1Q6P5S2 330 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 CORO6Q6QEF8 472 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 SMARCD3Q6STE5 483 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 CLEC9AQ6UXN8 241 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 DPY19L2P2Q6ZN68 376 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 RFPL4BQ6ZWI9 263 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 RRM2BQ7LG56 351 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 CCDC36Q8IYA8 594 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 OR6V1Q8N148 313 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 IQCF1Q8N6M8 205 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 CYB561A3Q8NBI2 242 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 NPEPL1Q8NDH3 523 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 SDR9C7Q8NEX9 313 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 OR4F15Q8NGB8 312 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 OR2T29Q8NH02 315 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 OR4Q3Q8NH05 313 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 OR4K13Q8NH42 304 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 FANK1Q8TC84 345 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 C10orf105Q8TEF2 133 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 MRPL24Q96A35 216 aaKnown RBP4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 TRMT61AQ96FX7 289 aaKnown RBP4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 RBP7Q96R05 134 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 SNX18Q96RF0 628 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 KCNS3Q9BQ31 491 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 IFT27Q9BW83 186 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 HCAR1Q9BXC0 346 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 REG4Q9BYZ8 158 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 OR2H1Q9GZK4 316 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 RERGLQ9H628 205 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 ZNF442Q9H7R0 627 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 RNF121Q9H920 327 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 MED20Q9H944 212 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 NTN4Q9HB63 628 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 RPRD1BQ9NQG5 326 aaKnown RBP4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 ARMC1Q9NVT9 282 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 MRPL22Q9NWU5 206 aaKnown RBP4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 NDE1Q9NXR1 346 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 GRHPRQ9UBQ7 328 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 SLC7A8Q9UHI5 535 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 PRPF19Q9UMS4 504 aaKnown RBP4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 AURKCQ9UQB9 309 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 POMPQ9Y244 141 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 TMEM5Q9Y2B1 443 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 FAM32AQ9Y421 112 aaKnown RBP4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 LHFPL6Q9Y693 200 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 DNHD1Q96M86 4753 aa4.08□□□□□ -1.76
EXOSC3-204ENST00000465860 COL6A5A8TX70 2615 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 IGLV3-9A0A075B6K5 115 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 IGHV4-61A0A0C4DH41 118 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 DHRS12A0PJE2 317 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 C5orf49A4QMS7 147 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 HTR3EA5X5Y0 456 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 A6NIZ1 184 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 INAFM1C9JVW0 142 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 ARPC3O15145 178 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 GYG2O15488 501 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 SYNGR3O43761 229 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 TMCC2O75069 709 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 TIPRLO75663 272 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 CCNB2O95067 398 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 FARS2O95363 451 aaKnown RBP4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 SNAP29O95721 258 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 CST1P01037 141 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 GYPBP06028 91 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 LCKP06239 509 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 HEXAP06865 529 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 ZNF250P15622 560 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 ITGA2P17301 1181 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 MSR1P21757 451 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 CCNOP22674 350 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 PYCR1P32322 319 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 GLRXP35754 106 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 MAGEB1P43366 347 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 PPOXP50336 477 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 EFNA4P52798 201 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 UCP2P55851 309 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 RAP1BP61224 184 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 RAP1AP62834 184 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 HIST1H3AP68431 136 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 HSF2Q03933 536 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 GLO1Q04760 184 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 CHRNB3Q05901 458 aa4.07□□□□□ -1.76
EXOSC3-204ENST00000465860 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms