RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 TNRC18O15417 2968 aaPredicted RBP17.59■□□□□ 0.41
SDF4-205ENST00000465727 CPAMD8Q8IZJ3 1885 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 A0A0A6YYC8 382 aaPredicted RBP17.59■□□□□ 0.41
SDF4-205ENST00000465727 TMEM269A0A1B0GVZ9 245 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 C9JQL5 133 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 I3L1I5 382 aaPredicted RBP17.59■□□□□ 0.41
SDF4-205ENST00000465727 JTBO76095 146 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 HTR3BO95264 441 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 PLGP00747 810 aaPredicted RBP17.59■□□□□ 0.41
SDF4-205ENST00000465727 FBP1P09467 338 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 EN2P19622 333 aaPredicted RBP17.59■□□□□ 0.41
SDF4-205ENST00000465727 EIF2S3P41091 472 aaKnown RBP17.59■□□□□ 0.41
SDF4-205ENST00000465727 TOMM34Q15785 309 aaPredicted RBP17.59■□□□□ 0.41
SDF4-205ENST00000465727 METTL8Q9H825 291 aaKnown RBP17.59■□□□□ 0.41
SDF4-205ENST00000465727 MYO7AQ13402 2215 aa17.58■□□□□ 0.4
SDF4-205ENST00000465727 TMEM14DPA8MWL7 114 aa17.58■□□□□ 0.4
SDF4-205ENST00000465727 TNFRSF10CO14798 259 aa17.58■□□□□ 0.4
SDF4-205ENST00000465727 DXOO77932 396 aaKnown RBP17.58■□□□□ 0.4
SDF4-205ENST00000465727 CLPSP04118 112 aa17.58■□□□□ 0.4
SDF4-205ENST00000465727 ACRP10323 421 aa17.58■□□□□ 0.4
SDF4-205ENST00000465727 PRF1P14222 555 aa17.58■□□□□ 0.4
SDF4-205ENST00000465727 CD1CP29017 333 aa17.58■□□□□ 0.4
SDF4-205ENST00000465727 SLC9A3R2Q15599 337 aa17.58■□□□□ 0.4
SDF4-205ENST00000465727 NSUN5P2Q63ZY6 315 aa17.58■□□□□ 0.4
SDF4-205ENST00000465727 Q7L0L9 218 aa17.58■□□□□ 0.4
SDF4-205ENST00000465727 MARCH3Q86UD3 253 aa17.58■□□□□ 0.4
SDF4-205ENST00000465727 STARD10Q9Y365 291 aa17.58■□□□□ 0.4
SDF4-205ENST00000465727 ARHGEF17Q96PE2 2063 aaPredicted RBP17.58■□□□□ 0.4
SDF4-205ENST00000465727 ALPK2Q86TB3 2170 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 TMEM131Q92545 1883 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 ZNF823P16415 610 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 RAB5AP20339 215 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 HAAOP46952 286 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 MMP16P51512 607 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 SUPT4H1P63272 117 aaKnown RBP17.57■□□□□ 0.4
SDF4-205ENST00000465727 ZP2Q05996 745 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 SRSF5Q13243 272 aaKnown RBP17.57■□□□□ 0.4
SDF4-205ENST00000465727 PCK2Q16822 640 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 CHRDL2Q6WN34 429 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 Q6ZRG5 221 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 BHLHE23Q8NDY6 225 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 OR52N4Q8NGI2 321 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 OR51F2Q8NH61 342 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 OR10C1Q96KK4 312 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 TMEM106CQ9BVX2 250 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 TMPRSS5Q9H3S3 457 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 FIGNL2A6NMB9 653 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 HKR1P10072 659 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 CCL5P13501 91 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 HSD17B7P56937 341 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 FAM3AP98173 230 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 EBPQ15125 230 aaKnown RBP17.57■□□□□ 0.4
SDF4-205ENST00000465727 FAM189A2Q15884 450 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 AWAT1Q58HT5 328 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 FGGYQ96C11 551 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 RGCCQ9H4X1 137 aa17.57■□□□□ 0.4
SDF4-205ENST00000465727 C7orf77A4D0Y5 90 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 PRAMEF26H0Y7S4 382 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 AP4M1O00189 453 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 P2RY10O00398 339 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 AGPAT2O15120 278 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 TO15178 435 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 HCRTR1O43613 425 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 LMX1BO60663 402 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 OR8U8P0C7N1 319 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 ACKR3P25106 362 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 NPY4RP50391 375 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 EMP2P54851 167 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 PRTGQ2VWP7 1150 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 ANKRD55Q3KP44 614 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 AKIRIN2Q53H80 203 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 DNM1P34Q6PK57 102 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 OPN5Q6U736 354 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 ETV3LQ6ZN32 361 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 DCXRQ7Z4W1 244 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 SLC22A8Q8TCC7 542 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 ST7LQ8TDW4 575 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 SECTM1Q8WVN6 248 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 SLC25A36Q96CQ1 311 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 COA3Q9Y2R0 106 aaPredicted RBP17.56■□□□□ 0.4
SDF4-205ENST00000465727 LAMA3Q16787 3333 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 FREM3P0C091 2139 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 A0A1W2PPE3 182 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 ZNF217O75362 1048 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 GNALP38405 381 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 ZNF117Q03924 483 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 SLC26A10Q8NG04 563 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 OR5D14Q8NGL3 314 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 RHBDD1Q8TEB9 315 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 EDARADDQ8WWZ3 215 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 ZNF285Q96NJ3 590 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 RTBDNQ9BSG5 229 aaPredicted RBP17.56■□□□□ 0.4
SDF4-205ENST00000465727 FAM60AQ9NP50 221 aa17.56■□□□□ 0.4
SDF4-205ENST00000465727 CLN5O75503 358 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 OR8U9P0C7N5 309 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 ST6GAL1P15907 406 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 LAP3P28838 519 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 SEC13P55735 322 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 S100A10P60903 97 aa17.55■□□□□ 0.4
SDF4-205ENST00000465727 SQSTM1Q13501 440 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms