RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 GOLGA4Q13439 2230 aaKnown RBP6.5□□□□□ -1.37
USP48-206ENST00000464577 TRAV20A0A0B4J274 112 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 TMEM269A0A1B0GVZ9 245 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 A0A1W2PQD3 144 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 FRG2CA6NGY1 282 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 A6NIZ1 184 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 C9JQL5 133 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 PRAMEF26H0Y7S4 382 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 P2RY10O00398 339 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 LMX1BO60663 402 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 NPIPB7O75200 414 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 ADAP1O75689 374 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 NSA2O95478 260 aaKnown RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 PLGP00747 810 aaPredicted RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 NME2P22392 152 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 CD1CP29017 333 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 CD80P33681 288 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 PPT1P50897 306 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 RAP1BP61224 184 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 RAP1AP62834 184 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 SUPT4H1P63272 117 aaKnown RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 SRSF5Q13243 272 aaKnown RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 RAB32Q13637 225 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 RBM39Q14498 530 aaKnown RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 FAM189A2Q15884 450 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 RPL7L1Q6DKI1 246 aaKnown RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 OPN5Q6U736 354 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 C5orf46Q6UWT4 87 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 MARCH3Q86UD3 253 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 LHFPL1Q86WI0 220 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 C19orf47Q8N9M1 422 aaKnown RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 SLC26A10Q8NG04 563 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 OR52N4Q8NGI2 321 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 RHBDD1Q8TEB9 315 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 SLC46A1Q96NT5 459 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 MAP3K3Q99759 626 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 KLHDC3Q9BQ90 382 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 OCSTAMPQ9BR26 566 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 FAM60AQ9NP50 221 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 OR2S2Q9NQN1 319 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 STARD10Q9Y365 291 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 KIR2DS5A0A0G2JLQ3 304 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 A0A0G2JNG1 304 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 FIGNL2A6NMB9 653 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 KIR2DS3K7RE56 304 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 PLPP3O14495 311 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 IGHV2-70P01814 119 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 CTSBP07858 339 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 HKR1P10072 659 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 GP1BBP13224 206 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 RPS2P15880 293 aaKnown RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 ST6GAL1P15907 406 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 HIST1H1DP16402 221 aaKnown RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 ZNF823P16415 610 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 PGCP20142 388 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 GLP1RP43220 463 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 TNFRSF4P43489 277 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 KIR2DL1P43626 348 aaPredicted RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 POLR2HP52434 150 aaKnown RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 EMP2P54851 167 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 UCP2P55851 309 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 SLC26A5P58743 744 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 ZP2Q05996 745 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 FABP9Q0Z7S8 132 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 KIR2DS5Q14953 304 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 SLC9A3R2Q15599 337 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 DEFB110Q30KQ9 67 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 ANKRD55Q3KP44 614 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 C1QL3Q5VWW1 255 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 TANGO2Q6ICL3 276 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 Q6ZRG5 221 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 C12orf76Q8N812 135 aaPredicted RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 BHLHE23Q8NDY6 225 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 OR51F2Q8NH61 342 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 RNF133Q8WVZ7 376 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 TCTEX1D2Q8WW35 142 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 FGGYQ96C11 551 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 OR10C1Q96KK4 312 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 BMFQ96LC9 184 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 GABRG3Q99928 467 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 RTBDNQ9BSG5 229 aaPredicted RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 NXF5Q9H1B4 397 aaKnown RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 LPAR5Q9H1C0 372 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 FAM206AQ9NX38 181 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 SRPK3Q9UPE1 567 aa6.49□□□□□ -1.37
USP48-206ENST00000464577 COA3Q9Y2R0 106 aaPredicted RBP6.49□□□□□ -1.37
USP48-206ENST00000464577 MPDZO75970 2070 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 A8MVM7 634 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 C17orf105B2RV13 164 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 H0Y8X5 98 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 WRBO00258 174 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 HCRTR2O43614 444 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 FKTNO75072 461 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 JTBO76095 146 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 SERPINA5P05154 406 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 FBP1P09467 338 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 H2BFMP0C1H6 154 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 CCL5P13501 91 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 PRF1P14222 555 aa6.48□□□□□ -1.37
USP48-206ENST00000464577 CBR1P16152 277 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms