RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 HOXD11P31277 338 aaPredicted RBP16.56■□□□□ 0.24
CCDC78-206ENST00000463539 TNFSF8P32971 234 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 THBS2P35442 1172 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 PSMD7P51665 324 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 PPP3R1P63098 170 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 PLP2Q04941 152 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 SNAI3Q3KNW1 292 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 GABRG1Q8N1C3 465 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 BORCS5Q969J3 196 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 FGGYQ96C11 551 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 WDFY2Q96P53 400 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 OPN3Q9H1Y3 402 aaPredicted RBP16.56■□□□□ 0.24
CCDC78-206ENST00000463539 IFITM5A6NNB3 132 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 J3QRK9 145 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 AIPO00170 330 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 IGLV3-1P01715 115 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 LCATP04180 440 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 GLI4P10075 376 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 ZNF12P17014 697 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 ZNF20P17024 532 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 UBE2NP61088 152 aaKnown RBP16.55■□□□□ 0.24
CCDC78-206ENST00000463539 CCDC190Q86UF4 302 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 CCDC36Q8IYA8 594 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 PARP16Q8N5Y8 322 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 ZNF610Q8N9Z0 462 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 DNAAF1Q8NEP3 725 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 OR1J2Q8NGS2 313 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 SOX7Q9BT81 388 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 SFXN3Q9BWM7 321 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 MIXL1Q9H2W2 232 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 PLEKHA1Q9HB21 404 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 TINAGQ9UJW2 476 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 ZNF835Q9Y2P0 537 aa16.55■□□□□ 0.24
CCDC78-206ENST00000463539 RP1L1Q8IWN7 2480 aaPredicted RBP16.54■□□□□ 0.24
CCDC78-206ENST00000463539 SFTPCP11686 197 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 EDN3P14138 238 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 IGFBP3P17936 291 aaPredicted RBP16.54■□□□□ 0.24
CCDC78-206ENST00000463539 STOMP27105 288 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 CEACAM8P31997 349 aaPredicted RBP16.54■□□□□ 0.24
CCDC78-206ENST00000463539 GNALP38405 381 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 ETV6P41212 452 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 GABRA6Q16445 453 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 MDP1Q86V88 176 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 SERPINA12Q8IW75 414 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 C1orf162Q8NEQ5 155 aaPredicted RBP16.54■□□□□ 0.24
CCDC78-206ENST00000463539 LYZL4Q96KX0 146 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 B3GNT2Q9NY97 397 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 LOC100509620A0A075B734 347 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 HPGDSO60760 199 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 HOXC12P31275 282 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 ZNF45Q02386 682 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 P2RY6Q15077 328 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 BEND4Q6ZU67 534 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 PLPP7Q8NBV4 271 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 TRMT10AQ8TBZ6 339 aaKnown RBP16.54■□□□□ 0.24
CCDC78-206ENST00000463539 ADAT3Q96EY9 351 aaPredicted RBP16.54■□□□□ 0.24
CCDC78-206ENST00000463539 DOCK7Q96N67 2140 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 ABRACLQ9P1F3 81 aa16.54■□□□□ 0.24
CCDC78-206ENST00000463539 C5orf49A4QMS7 147 aa16.53■□□□□ 0.24
CCDC78-206ENST00000463539 A6NIN4 97 aa16.53■□□□□ 0.24
CCDC78-206ENST00000463539 TMEM127O75204 238 aa16.53■□□□□ 0.24
CCDC78-206ENST00000463539 CCNOP22674 350 aa16.53■□□□□ 0.24
CCDC78-206ENST00000463539 HES5Q5TA89 166 aa16.53■□□□□ 0.24
CCDC78-206ENST00000463539 ZNF584Q8IVC4 421 aa16.53■□□□□ 0.24
CCDC78-206ENST00000463539 OR5D14Q8NGL3 314 aa16.53■□□□□ 0.24
CCDC78-206ENST00000463539 ZNF671Q8TAW3 534 aa16.53■□□□□ 0.24
CCDC78-206ENST00000463539 SGK3Q96BR1 496 aa16.53■□□□□ 0.24
CCDC78-206ENST00000463539 ADAM30Q9UKF2 790 aa16.53■□□□□ 0.24
CCDC78-206ENST00000463539 ITPR1Q14643 2758 aa16.53■□□□□ 0.24
CCDC78-206ENST00000463539 MTRF1O75570 445 aaKnown RBP16.52■□□□□ 0.24
CCDC78-206ENST00000463539 DHRS3O75911 302 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 PAHP00439 452 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 TSC22D1Q15714 1073 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 C16orf87Q6PH81 154 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 CXorf67Q86X51 503 aaPredicted RBP16.52■□□□□ 0.24
CCDC78-206ENST00000463539 SAMD12Q8N8I0 201 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 CCDC54Q8NEL0 328 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 OR51A2Q8NGJ7 313 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 OR14K1Q8NGZ2 314 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 REEP6Q96HR9 211 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 DIRAS2Q96HU8 199 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 C1QTNF5Q9BXJ0 243 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 SH3BGRL2Q9UJC5 107 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 ZNF391Q9UJN7 358 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 ARHGAP21Q5T5U3 1957 aa16.52■□□□□ 0.24
CCDC78-206ENST00000463539 A0A0B4J203 849 aa16.52■□□□□ 0.23
CCDC78-206ENST00000463539 CCL2P13500 99 aa16.52■□□□□ 0.23
CCDC78-206ENST00000463539 HOXB1P14653 301 aaPredicted RBP16.52■□□□□ 0.23
CCDC78-206ENST00000463539 SNRPBP14678 240 aaKnown RBP16.52■□□□□ 0.23
CCDC78-206ENST00000463539 APLNRP35414 380 aa16.52■□□□□ 0.23
CCDC78-206ENST00000463539 SPOCK1Q08629 439 aa16.52■□□□□ 0.23
CCDC78-206ENST00000463539 PMPCAQ10713 525 aa16.52■□□□□ 0.23
CCDC78-206ENST00000463539 OR2AE1Q8NHA4 323 aa16.52■□□□□ 0.23
CCDC78-206ENST00000463539 BOD1Q96IK1 185 aa16.52■□□□□ 0.23
CCDC78-206ENST00000463539 POM121L2Q96KW2 1035 aa16.52■□□□□ 0.23
CCDC78-206ENST00000463539 RGCCQ9H4X1 137 aa16.52■□□□□ 0.23
CCDC78-206ENST00000463539 MEGF11A6BM72 1044 aa16.51■□□□□ 0.23
CCDC78-206ENST00000463539 CD40LGP29965 261 aa16.51■□□□□ 0.23
CCDC78-206ENST00000463539 DDOSTP39656 456 aa16.51■□□□□ 0.23
CCDC78-206ENST00000463539 PPP5CP53041 499 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms