RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 MGLLQ99685 303 aa6.42□□□□□ -1.38
UBE4B-204ENST00000462658 ZNF649Q9BS31 505 aa6.42□□□□□ -1.38
UBE4B-204ENST00000462658 FUNDC2Q9BWH2 189 aa6.42□□□□□ -1.38
UBE4B-204ENST00000462658 SF3B5Q9BWJ5 86 aaKnown RBP6.42□□□□□ -1.38
UBE4B-204ENST00000462658 MRPL13Q9BYD1 178 aaKnown RBP6.42□□□□□ -1.38
UBE4B-204ENST00000462658 RACGAP1Q9H0H5 632 aa6.42□□□□□ -1.38
UBE4B-204ENST00000462658 PAQR5Q9NXK6 330 aaPredicted RBP6.42□□□□□ -1.38
UBE4B-204ENST00000462658 RSL24D1Q9UHA3 163 aaKnown RBP6.42□□□□□ -1.38
UBE4B-204ENST00000462658 CAB39Q9Y376 341 aaPredicted RBP6.42□□□□□ -1.38
UBE4B-204ENST00000462658 LIPGQ9Y5X9 500 aa6.42□□□□□ -1.38
UBE4B-204ENST00000462658 BOD1L1Q8NFC6 3051 aa6.42□□□□□ -1.38
UBE4B-204ENST00000462658 TMEM272A0A1B0GTI8 110 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 A0A1W2PQL4 384 aaPredicted RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 VGLL3A8MV65 326 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 CENPBD1B2RD01 187 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 ZNF670-ZNF695F2Z2N8 137 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 K7EM74 188 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 CYTIPO60759 359 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 NOL3O60936 208 aaKnown RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 KHDRBS3O75525 346 aaKnown RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 IGHG3P01860 377 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 HLA-DQA2P01906 255 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 PGA4P0DJD7 388 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 PGA3P0DJD8 388 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 CPN1P15169 458 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 CD36P16671 472 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 CD79BP40259 229 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 NR4A2P43354 598 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 TMBIM6P55061 237 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 ZNF85Q03923 595 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 FMODQ06828 376 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 SRSF1Q07955 248 aaKnown RBP eCLIP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 RASGEF1BQ0VAM2 473 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 IL13RA2Q14627 380 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 TSTQ16762 297 aaKnown RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 CARD17Q5XLA6 110 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 ZNF322Q6U7Q0 402 aaPredicted RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 FCRLAQ7L513 359 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 CHMP1BQ7LBR1 199 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 ERI1Q8IV48 349 aaKnown RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 TIGD4Q8IY51 512 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 RBMXL3Q8N7X1 1067 aaKnown RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 ZIC4Q8N9L1 334 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 ZNF485Q8NCK3 441 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 NOXO1Q8NFA2 376 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 OR52N1Q8NH53 320 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 ZNF420Q8TAQ5 688 aaPredicted RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 FNDC8Q8TC99 324 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 SPRYD4Q8WW59 207 aaPredicted RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 ISOC1Q96CN7 298 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 MRPL48Q96GC5 212 aaKnown RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 ZNF48Q96MX3 618 aaPredicted RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 FOXN4Q96NZ1 517 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 OPALINQ96PE5 141 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 ZNF385AQ96PM9 386 aaKnown RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 YIPF3Q9GZM5 350 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 NAA50Q9GZZ1 169 aaKnown RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 PRORYQ9H606 182 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 MARCH7Q9H992 704 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 ISYNA1Q9NPH2 558 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 BABAM2Q9NXR7 383 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 MCTS1Q9ULC4 181 aaKnown RBP6.41□□□□□ -1.38
UBE4B-204ENST00000462658 PIEZO2Q9H5I5 2752 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 MED12Q93074 2177 aa6.41□□□□□ -1.38
UBE4B-204ENST00000462658 NCKAP5O14513 1909 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 TRBV5-7A0A0A0MS05 114 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 IGKV1D-43A0A0B4J1Z2 117 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 A0A1B0GVC2 190 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 ZNF716A6NP11 495 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 J3QLW9 94 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 ZNF701M0R085 212 aaPredicted RBP6.4□□□□□ -1.38
UBE4B-204ENST00000462658 CCRL2O00421 344 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 ZNF593O00488 134 aaPredicted RBP6.4□□□□□ -1.38
UBE4B-204ENST00000462658 QDPRP09417 244 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 NR2C1P13056 603 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 ZNF19P17023 458 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 TGFBR2P37173 567 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 CSNK1A1P48729 337 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 RGS6P49758 472 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 HSF2Q03933 536 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 GLO1Q04760 184 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 ACSM1Q08AH1 577 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 MLLT11Q13015 90 aaPredicted RBP6.4□□□□□ -1.38
UBE4B-204ENST00000462658 C3AR1Q16581 482 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 HIST3H3Q16695 136 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 CNPY1Q3B7I2 92 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 RPUSD3Q6P087 351 aaKnown RBP6.4□□□□□ -1.38
UBE4B-204ENST00000462658 SLC25A47Q6Q0C1 308 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 SSX6Q7RTT6 188 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 DPY19L4Q7Z388 723 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.4□□□□□ -1.38
UBE4B-204ENST00000462658 P2RY8Q86VZ1 359 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 CDC20BQ86Y33 519 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 SIAH3Q8IW03 269 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 OR6N1Q8NGY5 312 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 OR6N2Q8NGY6 317 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 RAB2BQ8WUD1 216 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 NSMAFQ92636 917 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 TMEM54Q969K7 222 aa6.4□□□□□ -1.38
UBE4B-204ENST00000462658 MCHR2Q969V1 340 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms